RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 MAP3K7O43318 606 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 SLITRK3O94933 977 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 ZWINTO95229 277 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 LCA5LO95447 670 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 CYP11B1P15538 503 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 MAPK6Q16659 721 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 PLA2G4FQ68DD2 849 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 CBWD2Q8IUF1 395 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 NME8Q8N427 588 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 GMCL1Q96IK5 515 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 HEXIM2Q96MH2 286 aaKnown RBP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 POLR3FQ9H1D9 316 aaPredicted RBP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 CDC42EP4Q9H3Q1 356 aaKnown RBP8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 UNC45AQ9H3U1 944 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 KLHL11Q9NVR0 708 aa8.7□□□□□ -1.02
PRKAB1-207ENST00000542698 TOM1L1O75674 476 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 MYCNP04198 464 aaPredicted RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ARL1P40616 181 aaPredicted RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 COPS2P61201 443 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 IGBP1P78318 339 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 IFI35P80217 286 aaPredicted RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 RBBP5Q15291 538 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 RHPN2Q8IUC4 686 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 WDR75Q8IWA0 830 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 PPM1NQ8N819 430 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 PGM2Q96G03 612 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 CFAP36Q96G28 342 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ZDHHC15Q96MV8 337 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 SENP7Q9BQF6 1050 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 KCTD10Q9H3F6 313 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 FBXO28Q9NVF7 368 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 TTLL3Q9Y4R7 772 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 BTNL10A8MVZ5 291 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 GOLGA8RI6L899 631 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 EML1O00423 815 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 KRT38O76015 456 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 PDHA1P08559 390 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 PSMC1P62191 440 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 DNAJC3Q13217 504 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 CDO1Q16878 200 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ANKRD20A8PQ5CZ79 823 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 AP1ARQ63HQ0 302 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 CAPRIN2Q6IMN6 1127 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 POTEAQ6S8J7 498 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 OTOP1Q7RTM1 612 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 CRLF3Q8IUI8 442 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ANKMY2Q8IV38 441 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 C7orf31Q8N865 590 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 RAB3IL1Q8TBN0 382 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 FAM149B1Q96BN6 582 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 KCNMB3Q9NPA1 279 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 DDX56Q9NY93 547 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 WHRNQ9P202 907 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ZHX2Q9Y6X8 837 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 AFDNP55196 1824 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 RBAK-RBAKDNI3L0D1 243 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 CLGNO14967 610 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ADAMTS3O15072 1205 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 KIF1CO43896 1103 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 LPXNO60711 386 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 TTC4O95801 387 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 GSTA1P08263 222 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 PYGMP11217 842 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 POLD1P28340 1107 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ECE1P42892 770 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ECM1Q16610 540 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 GEN1Q17RS7 908 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 DUOXA2Q1HG44 320 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ZNF699Q32M78 642 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 SNRNP48Q6IEG0 339 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 C11orf63Q6NUN7 778 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 EXOC8Q8IYI6 725 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 AGGF1Q8N302 714 aaeCLIP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ACER1Q8TDN7 264 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 NSMCE1Q8WV22 266 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 AGBL1Q96MI9 1066 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 NLRP4Q96MN2 994 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 UBXN6Q9BZV1 441 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 RPF1Q9H9Y2 349 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 ALG13Q9NP73 1137 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 SEPT10Q9P0V9 454 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 TPX2Q9ULW0 747 aaKnown RBP8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 HEY1Q9Y5J3 304 aa8.69□□□□□ -1.02
PRKAB1-207ENST00000542698 SRRM3A6NNA2 597 aaPredicted RBP8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 ASAP2O43150 1006 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 ECM2O94769 699 aaPredicted RBP8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 RPL21P46778 160 aaKnown RBP8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 CENPCQ03188 943 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 PSMD6Q15008 389 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 STXBP2Q15833 593 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 CBWD6Q4V339 395 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 PPP6R3Q5H9R7 873 aaPredicted RBP8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 CBWD3Q5JTY5 395 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 CBWD5Q5RIA9 395 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 SLC47A2Q86VL8 602 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 RTKN2Q8IZC4 609 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 FUKQ8N0W3 1084 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 RIBC1Q8N443 379 aaPredicted RBP8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 TTLL6Q8N841 843 aa8.68□□□□□ -1.02
PRKAB1-207ENST00000542698 ARHGEF26Q96DR7 871 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms