RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 LINC01465Q8N7H1 131 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 C12orf76Q8N812 135 aaPredicted RBP2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 TMEM87AQ8NBN3 555 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 CCDC191Q8NCU4 936 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 GAB3Q8WWW8 586 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 STAMQ92783 540 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 KCNB2Q92953 911 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 RELTQ969Z4 430 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 HIC2Q96JB3 615 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 FEZ1Q99689 392 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 CEP44Q9C0F1 390 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 NGRNQ9NPE2 291 aaKnown RBP2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 DISC1Q9NRI5 854 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 LATS2Q9NRM7 1088 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 KIAA1522Q9P206 1035 aaPredicted RBP2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 EPS15L1Q9UBC2 864 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 HERC5Q9UII4 1024 aaKnown RBP2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 ITGB1BP2Q9UKP3 347 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 PCDHB12Q9Y5F1 795 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 DOCK2Q92608 1830 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 TANC1Q9C0D5 1861 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 ATG2BQ96BY7 2078 aa2.69□□□□□ -1.98
TRAV1-1-201ENST00000542354 A0A087X0B3 334 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 TMEM238LA0A1B0GVL6 79 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 WIPF3A6NGB9 483 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 RSPH10B2B2RC85 870 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 NPIPB6E9PJ23 425 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 MEFVO15553 781 aaPredicted RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 PLIN1O60240 522 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ATP9AO75110 1047 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 SEMA7AO75326 666 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 AKAP3O75969 853 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 AGFG2O95081 481 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ABL1P00519 1130 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 INHBBP09529 407 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 RSPH10BP0C881 870 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 SFTPCP11686 197 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 VCAM1P19320 739 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZEB1P37275 1124 aaPredicted RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 RBMXP38159 391 aaKnown RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 KIR3DL1P43629 444 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 PHKA1P46020 1223 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 CPT1AP50416 773 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 RHBDL3P58872 404 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 IRX4P78413 519 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 SATB1Q01826 763 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 SEMG2Q02383 582 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 PDE4BQ07343 736 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 PDE4CQ08493 712 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 PICALMQ13492 652 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 BMS1Q14692 1282 aaKnown RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZYXQ15942 572 aaKnown RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZNF385BQ569K4 471 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZNF618Q5T7W0 954 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 LCE5AQ5TCM9 118 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 PLPP4Q5VZY2 271 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 TMC5Q6UXY8 1006 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 SPNS3Q6ZMD2 512 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 RASGRP2Q7LDG7 609 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 CABP7Q86V35 215 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 GLYCTKQ8IVS8 523 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 CMTR2Q8IYT2 770 aaKnown RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 MFSD4AQ8N468 514 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 SPEM1Q8N4L4 309 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 OXR1Q8N573 874 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ABHD4Q8TB40 342 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZNF507Q8TCN5 953 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 DHX38Q92620 1227 aaKnown RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 FGF11Q92914 225 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZNF689Q96CS4 500 aaPredicted RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 DMRTB1Q96MA1 342 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ALPK1Q96QP1 1244 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 TCF25Q9BQ70 676 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 TANGO6Q9C0B7 1094 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 SLC6A17Q9H1V8 727 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 RPAP3Q9H6T3 665 aaPredicted RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 LMAN1LQ9HAT1 526 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ENTPD7Q9NQZ7 604 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 STARD5Q9NSY2 213 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 TMEM260Q9NX78 707 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 DDX41Q9UJV9 622 aaKnown RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 TPX2Q9ULW0 747 aaKnown RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 ADAMTS5Q9UNA0 930 aa2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 MRPL42Q9Y6G3 142 aaKnown RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 FNDC1Q4ZHG4 1894 aaPredicted RBP2.68□□□□□ -1.98
TRAV1-1-201ENST00000542354 CCDC163A0A0D9SF12 145 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 A1L4Q6 167 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 HIDE1A8MVS5 230 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 ANHXE9PGG2 379 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 RBAK-RBAKDNI3L0D1 243 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 MAN2B1O00754 1011 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 TLX3O43711 291 aaPredicted RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 FZD6O60353 706 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 DGKIO75912 1065 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 FGF18O76093 207 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 LRIG2O94898 1065 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 PAPSS2O95340 614 aaPredicted RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 NADKO95544 446 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms