RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 QRSL1Q9H0R6 528 aaKnown RBP5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 TMEM60Q9H2L4 133 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZBTB1Q9Y2K1 713 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 TAF1P21675 1872 aa5.71□□□□□ -1.5
HMGB1P23-201ENST00000518743 FAM208BQ5VWN6 2430 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 RAB3GAP2Q9H2M9 1393 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 SCN7AQ01118 1682 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZSWIM8A7E2V4 1837 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 FAM90A27PA6NNH2 459 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 ERVV-2B6SEH9 535 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 GOLGA6L22H0YM25 854 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 NRP2O60462 931 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRPF6O94906 941 aaKnown RBP5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 GLI4P10075 376 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRKCAP17252 672 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 MVKQ03426 396 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZP2Q05996 745 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 ADCY2Q08462 1091 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 TMEM62Q0P6H9 643 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 IFIT5Q13325 482 aaKnown RBP5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 RRS1Q15050 365 aaKnown RBP5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 PGS1Q32NB8 556 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 UAP1L1Q3KQV9 507 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 PPP4R3AQ6IN85 833 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 CCDC62Q6P9F0 684 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZDHHC13Q8IUH4 622 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 FAM186BQ8IYM0 893 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 OR14C36Q8NHC7 312 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 WDR48Q8TAF3 677 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 ASB15Q8WXK1 588 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 FATE1Q969F0 183 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 EAF2Q96CJ1 260 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 COG3Q96JB2 828 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 LBHD1Q9BQE6 289 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 ANO3Q9BYT9 981 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 TTYH1Q9H313 450 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 IFT122Q9HBG6 1241 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 KMT5AQ9NQR1 393 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 SLAMF8Q9P0V8 285 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 SLC5A6Q9Y289 635 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 PPP2R3BQ9Y5P8 575 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 ZNF318Q5VUA4 2279 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 RIC1Q4ADV7 1423 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 USP34Q70CQ2 3546 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 ASTN2O75129 1339 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 FAM205AQ6ZU69 1335 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 CFAP47Q6ZTR5 3102 aa5.7□□□□□ -1.5
HMGB1P23-201ENST00000518743 RTL1A6NKG5 1358 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 KIF24Q5T7B8 1368 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 NCOR2Q9Y618 2525 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 TPP1O14773 563 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 PMM2O15305 246 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 SGPL1O95470 568 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 CYBBP04839 570 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 RAC2P15153 192 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 RPL17P18621 184 aaKnown RBP5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 PDCP20941 246 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 C5AR1P21730 350 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 USP14P54578 494 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 NR1I3Q14994 352 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 PAN2Q504Q3 1202 aaKnown RBP5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 CT83Q5H943 113 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 C10orf62Q5T681 223 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRAMEF18Q5VWM3 479 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRAMEF9Q5VWM5 478 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 FSTL4Q6MZW2 842 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 CCDC149Q6ZUS6 474 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 ARMC9Q7Z3E5 817 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 MILR1Q7Z6M3 343 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 GRAMD1CQ8IYS0 662 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 NAP1L4Q99733 375 aaKnown RBP5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 ACE2Q9BYF1 805 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 GTPBP4Q9BZE4 634 aaKnown RBP5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 ADAMTS10Q9H324 1103 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 PLCB1Q9NQ66 1216 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 HSPBP1Q9NZL4 362 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 ARHGAP28Q9P2N2 729 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 TAGLN3Q9UI15 199 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 PHTF1Q9UMS5 762 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 SCAF8Q9UPN6 1271 aaKnown RBP5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 FAM50BQ9Y247 325 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 RIF1Q5UIP0 2472 aaKnown RBP5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 NAV2Q8IVL1 2488 aa5.69□□□□□ -1.5
HMGB1P23-201ENST00000518743 MAP1BP46821 2468 aaKnown RBP5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 LAMB2P55268 1798 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 TCRBV5S2A0A599 114 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 GOLIM4O00461 696 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 APAF1O14727 1248 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 PRLP01236 227 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 OSMP13725 252 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 PNLIPP16233 465 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 FAHP16930 419 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 XPAP23025 273 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 TACR1P25103 407 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 AOAHP28039 575 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 WASP42768 502 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 ALDH6A1Q02252 535 aaKnown RBP5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 SEC23AQ15436 765 aa5.68□□□□□ -1.5
HMGB1P23-201ENST00000518743 PITRM1Q5JRX3 1037 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms