RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 PPP1R3GB7ZBB8 358 aa17.08■□□□□ 0.33
HMGXB3-202ENST00000503427 KITP10721 976 aa17.08■□□□□ 0.33
HMGXB3-202ENST00000503427 HIF1AQ16665 826 aa17.08■□□□□ 0.33
HMGXB3-202ENST00000503427 HP1BP3Q5SSJ5 553 aaPredicted RBP17.08■□□□□ 0.33
HMGXB3-202ENST00000503427 ELMSAN1Q6PJG2 1045 aa17.08■□□□□ 0.33
HMGXB3-202ENST00000503427 SMYD3Q9H7B4 428 aa17.08■□□□□ 0.33
HMGXB3-202ENST00000503427 L2HGDHQ9H9P8 463 aa17.08■□□□□ 0.33
HMGXB3-202ENST00000503427 SMG5Q9UPR3 1016 aaKnown RBP17.08■□□□□ 0.33
HMGXB3-202ENST00000503427 SALL1Q9NSC2 1324 aa17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 PI4K2BG5E9Z4 385 aa17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 YWHAHQ04917 246 aaPredicted RBP17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 TEDDM1Q5T9Z0 273 aa17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 SYN2Q92777 582 aaPredicted RBP17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 ERGIC2Q96RQ1 377 aa17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 RTFDC1Q9BY42 306 aaPredicted RBP17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 MAGEB2O15479 319 aa17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 HNRNPCL1O60812 293 aaKnown RBP17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 CDH16O75309 829 aa17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 ZFXP17010 805 aaPredicted RBP17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 URGCPQ8TCY9 931 aa17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 BFARQ9NZS9 450 aa17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 SUCLA2Q9P2R7 463 aaPredicted RBP17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 INPP5FQ9Y2H2 1132 aa17.08■□□□□ 0.32
HMGXB3-202ENST00000503427 EIF3DO15371 548 aaKnown RBP eCLIP17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 OR6J1Q8NGC5 347 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 FAM161BQ96MY7 647 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 FNDC3AQ9Y2H6 1198 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 IL1R1P14778 569 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 RCOR2Q8IZ40 523 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 TCP11X1B4DZS4 312 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 FAM102AQ5T9C2 384 aaPredicted RBP17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 ANKRD13AQ8IZ07 590 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 GCNAQ96QF7 691 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 POLR3CQ9BUI4 534 aaPredicted RBP17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 MOV10L1Q9BXT6 1211 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 TRABDQ9H4I3 376 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 KRT82Q9NSB4 513 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 FAM217BQ9NTX9 383 aaPredicted RBP17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 CFAP69A5D8W1 941 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 MOXD1Q6UVY6 613 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 REXO1L1PQ8IX06 675 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 ZNF710Q8N1W2 664 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 PRMT1Q99873 361 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 TRIM51Q9BSJ1 452 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 FSD1LQ9BXM9 530 aa17.07■□□□□ 0.32
HMGXB3-202ENST00000503427 GH1P01241 217 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 CAP2P40123 477 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 INPP1P49441 399 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 CNPY4Q8N129 248 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 ZBTB18Q99592 522 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 ANKEF1Q9NU02 776 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 NDE1Q9NXR1 346 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 ADGRB2O60241 1585 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 ZNF189O75820 626 aaPredicted RBP17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 CHN1P15882 459 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 LRRC23Q53EV4 343 aaPredicted RBP17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 NOA1Q8NC60 698 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 KCNV2Q8TDN2 545 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 MKNK1Q9BUB5 465 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 WWP1Q9H0M0 922 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 MAP3K20Q9NYL2 800 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 FHOD1Q9Y613 1164 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 TAF1CQ15572 869 aaPredicted RBP17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 RBM43Q6ZSC3 357 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 EXT2Q93063 718 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 ACAP3Q96P50 834 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 CCDC195A0A1B0GUA6 201 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 DIAPH2O60879 1101 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 RAD23BP54727 409 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 CDH6P55285 790 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 MORF4L2Q15014 288 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 ITPRIPL1Q6GPH6 555 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 SAMD3Q8N6K7 520 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 MAGEB5Q9BZ81 275 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 GTSE1Q9NYZ3 720 aa17.06■□□□□ 0.32
HMGXB3-202ENST00000503427 ICAM1P05362 532 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 TMEM253P0C7T8 217 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 EP400NLQ6ZTU2 488 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 SAMD7Q7Z3H4 446 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 KIF12Q96FN5 646 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 SLC13A1Q9BZW2 595 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 PPCSQ9HAB8 311 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 F8W8V4 182 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 TGFB2P61812 414 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 RGS9BPQ6ZS82 235 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 GPRASP2Q96D09 838 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 PRMT6Q96LA8 375 aaPredicted RBP17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 FOXP3Q9BZS1 431 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 SPDYE2BA6NHP3 402 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 RAD51CO43502 376 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 SPDYE6P0CI01 402 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 PTPAQ15257 358 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 USP38Q8NB14 1042 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 RIN2Q8WYP3 895 aaPredicted RBP17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 XPO6Q96QU8 1125 aaKnown RBP17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 SEC23AQ15436 765 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 TTC8Q8TAM2 541 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 ANKS1AQ92625 1134 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 SGSM3Q96HU1 749 aa17.05■□□□□ 0.32
HMGXB3-202ENST00000503427 KATNAL1Q9BW62 490 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms