RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 SEM1Q6ZVN7 128 aa6.26□□□□□ -1.41
HMGB1P38-201ENST00000490557 TCEAL8Q8IYN2 117 aa6.26□□□□□ -1.41
HMGB1P38-201ENST00000490557 PRR18Q8N4B5 295 aa6.26□□□□□ -1.41
HMGB1P38-201ENST00000490557 AOPEPQ8N6M6 819 aa6.26□□□□□ -1.41
HMGB1P38-201ENST00000490557 C1GALT1C1Q96EU7 318 aa6.26□□□□□ -1.41
HMGB1P38-201ENST00000490557 MYOCQ99972 504 aa6.26□□□□□ -1.41
HMGB1P38-201ENST00000490557 C1QTNF3Q9BXJ4 246 aa6.26□□□□□ -1.41
HMGB1P38-201ENST00000490557 PACSIN1Q9BY11 444 aa6.26□□□□□ -1.41
HMGB1P38-201ENST00000490557 PARPBPQ9NWS1 579 aa6.26□□□□□ -1.41
HMGB1P38-201ENST00000490557 SORCS3Q9UPU3 1222 aa6.26□□□□□ -1.41
HMGB1P38-201ENST00000490557 TCRBV7S2A1N4TA0A589 114 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 KLRG2A4D1S0 409 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 CD1AP06126 327 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 ADRB1P08588 477 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 ATF3P18847 181 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 DSC2Q02487 901 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 NHLH2Q02577 135 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 TLE1Q04724 770 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 UBXN2BQ14CS0 331 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 R3HDM1Q15032 1099 aaKnown RBP6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 NAIF1Q69YI7 327 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 NXNQ6DKJ4 435 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 MED25Q71SY5 747 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 GPRIN1Q7Z2K8 1008 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 MAGEB6Q8N7X4 407 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 TSR2Q969E8 191 aaKnown RBP6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 MTFMTQ96DP5 389 aaKnown RBP6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 CCDC136Q96JN2 1154 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 MRGPRX4Q96LA9 322 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 NDC1Q9BTX1 674 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 GNL3LQ9NVN8 582 aaKnown RBP6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 SLC23A1Q9UHI7 598 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 FEZ2Q9UHY8 353 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 PCDHA3Q9Y5H8 950 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 XDHP47989 1333 aa6.25□□□□□ -1.41
HMGB1P38-201ENST00000490557 LRRC14BA6NHZ5 514 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 WNT10BO00744 389 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 PRRG2O14669 202 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 GRM6O15303 877 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 SCAF4O95104 1147 aaKnown RBP6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 MALP21145 153 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 LPOP22079 712 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 CHN2P52757 468 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 NOGQ13253 232 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 GFOD2Q3B7J2 385 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 PABPC1LQ4VXU2 614 aaKnown RBP6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 ARHGAP29Q52LW3 1261 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 SLC4A10Q6U841 1118 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 EPM2AIP1Q7L775 607 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 HEATR3Q7Z4Q2 680 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 DENND1CQ8IV53 801 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 SLC35G2Q8TBE7 412 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 CPT1CQ8TCG5 803 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 SH3RF3Q8TEJ3 882 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 DIS3LQ8TF46 1054 aaKnown RBP6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 EXTL1Q92935 676 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 DCLRE1CQ96SD1 692 aaKnown RBP6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 SLC12A5Q9H2X9 1139 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 LMBRD1Q9NUN5 540 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 CHPF2Q9P2E5 772 aa6.24□□□□□ -1.41
HMGB1P38-201ENST00000490557 DRGXA6NNA5 263 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 ERC2O15083 957 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 TRIM24O15164 1050 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 CTNND1O60716 968 aaKnown RBP6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 HAUS5O94927 633 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 PARNO95453 639 aaKnown RBP6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 ITGB1P05556 798 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 GNAI3P08754 354 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 SPATA31D3P0C874 917 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 APOBEC3AP31941 199 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 IL12RB1P42701 662 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 FXR1P51114 621 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 MAP2K6P52564 334 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 GNAI1P63096 354 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 DACT2Q5SW24 774 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 C1QL3Q5VWW1 255 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 PPP4R4Q6NUP7 873 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 SPATA31D4Q6ZUB0 917 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 HTR3DQ70Z44 454 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 TMPRSS6Q8IU80 811 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 SH2D3CQ8N5H7 860 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 FITM2Q8N6M3 262 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 CDK5RAP3Q96JB5 506 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 FAM167AQ96KS9 214 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 PLEKHG4BQ96PX9 1271 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 KRTAP3-1Q9BYR8 98 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 GSTO2Q9H4Y5 243 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 ANLNQ9NQW6 1124 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 TRPM5Q9NZQ8 1165 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 ABCF2Q9UG63 623 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 NCANO14594 1321 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 PNPLA7Q6ZV29 1317 aa6.23□□□□□ -1.41
HMGB1P38-201ENST00000490557 DIRC3C9JPN6 131 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 H3BUI4 141 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 PRPF3O43395 683 aaKnown RBP6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 FAM20BO75063 409 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 FTH1P19P0C7X4 201 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 HK3P52790 923 aa6.22□□□□□ -1.41
HMGB1P38-201ENST00000490557 RNASE9P60153 205 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 289 ms