RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TRIP11Q15643 1979 aa16.97■□□□□ 0.31
U2AF1-211ENST00000486519 THADAQ6YHU6 1953 aa16.97■□□□□ 0.31
U2AF1-211ENST00000486519 PLXNB3Q9ULL4 1909 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 SPAARA0A1B0GVQ0 90 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 PRB1P04280 392 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 CSRP1P21291 193 aaKnown RBP16.96■□□□□ 0.31
U2AF1-211ENST00000486519 CTHP32929 405 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 CIITAP33076 1130 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 CREB5Q02930 508 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 GRIK3Q13003 919 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 EXOC6Q8TAG9 804 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 SLC5A5Q92911 643 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 SMARCD2Q92925 531 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 ZFYVE19Q96K21 471 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 CSRNP2Q9H175 543 aa16.96■□□□□ 0.31
U2AF1-211ENST00000486519 MYO16Q9Y6X6 1858 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 HEPACAM2A8MVW5 462 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 SPECC1L-ADORA2AF8WAN1 911 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 B4GALT5O43286 388 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 GAS7O60861 476 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 PTPN2P17706 415 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 KPNA1P52294 538 aaPredicted RBP16.95■□□□□ 0.3
U2AF1-211ENST00000486519 JAK3P52333 1124 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 AMHR2Q16671 573 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 LRCH2Q5VUJ6 765 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 DAB2IPQ5VWQ8 1189 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 MIER3Q7Z3K6 550 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 RNF149Q8NC42 400 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 ZSCAN18Q8TBC5 510 aaPredicted RBP16.95■□□□□ 0.3
U2AF1-211ENST00000486519 LRRC3BQ96PB8 259 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 WRAP73Q9P2S5 460 aaPredicted RBP16.95■□□□□ 0.3
U2AF1-211ENST00000486519 MTRRQ9UBK8 725 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 SLC12A7Q9Y666 1083 aa16.95■□□□□ 0.3
U2AF1-211ENST00000486519 NAV2Q8IVL1 2488 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 ADAMTS9Q9P2N4 1935 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 KIAA1549LQ6ZVL6 1849 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 BCLAF3A2AJT9 711 aaKnown RBP16.94■□□□□ 0.3
U2AF1-211ENST00000486519 MYBPHLA2RUH7 354 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 PTGESO14684 152 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 SEC24AO95486 1093 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 CAVIN2O95810 425 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 SFNP31947 248 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 NAB2Q15742 525 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 UAP1L1Q3KQV9 507 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 B3GNT9Q6UX72 402 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 CD300LGQ6UXG3 332 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 MFSD6LQ8IWD5 586 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 DEPDC1BQ8WUY9 529 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 TEKT3Q9BXF9 490 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 CACNA2D2Q9NY47 1150 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 GTSE1Q9NYZ3 720 aa16.94■□□□□ 0.3
U2AF1-211ENST00000486519 ARHGEF37A1IGU5 675 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 I3L4J1 428 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 PSMD10O75832 226 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 ERLIN2O94905 339 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 NPTXRO95502 500 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 ARF4P18085 180 aaPredicted RBP16.93■□□□□ 0.3
U2AF1-211ENST00000486519 FGFR3P22607 806 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 TKTP29401 623 aaKnown RBP16.93■□□□□ 0.3
U2AF1-211ENST00000486519 LIFRP42702 1097 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 FGD1P98174 961 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 TUSC3Q13454 348 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 HDAC1Q13547 482 aaPredicted RBP16.93■□□□□ 0.3
U2AF1-211ENST00000486519 DGKKQ5KSL6 1271 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 NOTUMQ6P988 496 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 CSGALNACT1Q8TDX6 532 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 DDX27Q96GQ7 796 aaKnown RBP16.93■□□□□ 0.3
U2AF1-211ENST00000486519 PARP2Q9UGN5 583 aa16.93■□□□□ 0.3
U2AF1-211ENST00000486519 TNRC6BQ9UPQ9 1833 aaKnown RBP16.93■□□□□ 0.3
U2AF1-211ENST00000486519 TEAD2Q15562 447 aa16.92■□□□□ 0.3
U2AF1-211ENST00000486519 FERMT3Q86UX7 667 aa16.92■□□□□ 0.3
U2AF1-211ENST00000486519 CHCHD4Q8N4Q1 142 aa16.92■□□□□ 0.3
U2AF1-211ENST00000486519 HNRNPLLQ8WVV9 542 aaKnown RBP16.92■□□□□ 0.3
U2AF1-211ENST00000486519 PSPC1Q8WXF1 523 aaKnown RBP16.92■□□□□ 0.3
U2AF1-211ENST00000486519 HHIPQ96QV1 700 aa16.92■□□□□ 0.3
U2AF1-211ENST00000486519 RIT2Q99578 217 aa16.92■□□□□ 0.3
U2AF1-211ENST00000486519 DHX33Q9H6R0 707 aaKnown RBP16.92■□□□□ 0.3
U2AF1-211ENST00000486519 TMEM9BQ9NQ34 198 aa16.92■□□□□ 0.3
U2AF1-211ENST00000486519 INVSQ9Y283 1065 aa16.92■□□□□ 0.3
U2AF1-211ENST00000486519 NUP210Q8TEM1 1887 aaPredicted RBP16.92■□□□□ 0.3
U2AF1-211ENST00000486519 EML1O00423 815 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 LRG1P02750 347 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 MLLT6P55198 1093 aaPredicted RBP16.91■□□□□ 0.3
U2AF1-211ENST00000486519 FAM193AP78312 1265 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 IRX4P78413 519 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 ROR1Q01973 937 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 MBTD1Q05BQ5 628 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 TNK2Q07912 1038 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 SCAPQ12770 1279 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.91■□□□□ 0.3
U2AF1-211ENST00000486519 PDZD4Q76G19 769 aaPredicted RBP16.91■□□□□ 0.3
U2AF1-211ENST00000486519 TEX2Q8IWB9 1127 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 CRELD1Q96HD1 420 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 CCDC136Q96JN2 1154 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 TMEM87BQ96K49 555 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 C8orf33Q9H7E9 229 aaPredicted RBP16.91■□□□□ 0.3
U2AF1-211ENST00000486519 TRPV4Q9HBA0 871 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 ANKFY1Q9P2R3 1169 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 BRPF3Q9ULD4 1205 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms