RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 AIFM3Q96NN9 605 aa20.97■□□□□ 0.95
NCKIPSD-209ENST00000470006 CORO1BQ9BR76 489 aa20.97■□□□□ 0.95
NCKIPSD-209ENST00000470006 IER2Q9BTL4 223 aa20.97■□□□□ 0.95
NCKIPSD-209ENST00000470006 NFKBIZQ9BYH8 718 aa20.97■□□□□ 0.95
NCKIPSD-209ENST00000470006 MTRRQ9UBK8 725 aa20.97■□□□□ 0.95
NCKIPSD-209ENST00000470006 ANGPTL2Q9UKU9 493 aa20.97■□□□□ 0.95
NCKIPSD-209ENST00000470006 SNX14Q9Y5W7 946 aa20.97■□□□□ 0.95
NCKIPSD-209ENST00000470006 PTGESO14684 152 aa20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 TBX3O15119 743 aa20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 GDF9O60383 454 aa20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 RECQL4O94761 1208 aa20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 SLITRK3O94933 977 aa20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 GDI1P31150 447 aa20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 CSRP2Q16527 193 aa20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 POTEDQ86YR6 584 aa20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 DDX1Q92499 740 aaKnown RBP20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 PRMT7Q9NVM4 692 aaPredicted RBP20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 RALYQ9UKM9 306 aaKnown RBP20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 CNOT1A5YKK6 2376 aaKnown RBP20.96■□□□□ 0.95
NCKIPSD-209ENST00000470006 SHISA7A6NL88 538 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 CHURC1-FNTBB4DL54 471 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 B3GAT3O94766 335 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 LIG1P18858 919 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 FGFR3P22607 806 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 PSMA5P28066 241 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 FNTBP49356 437 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 ARPP19P56211 112 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 SATB1Q01826 763 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 NPY5RQ15761 445 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 FAM78AQ5JUQ0 283 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 CPLX2Q6PUV4 134 aaKnown RBP20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 NOSTRINQ8IVI9 506 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 ZBTB8OSQ8IWT0 167 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 SLFN12Q8IYM2 578 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 FBXL16Q8N461 479 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 NAP1L4Q99733 375 aaKnown RBP20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 EIF2AK1Q9BQI3 630 aaKnown RBP20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 ANKEF1Q9NU02 776 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 GDAQ9Y2T3 454 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 PIAS3Q9Y6X2 628 aa20.95■□□□□ 0.94
NCKIPSD-209ENST00000470006 TICRRQ7Z2Z1 1910 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 ZNF197O14709 1029 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 N4BP3O15049 544 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 USO1O60763 962 aaKnown RBP20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 CDC45O75419 566 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 TKTP29401 623 aaKnown RBP20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 SRSF5Q13243 272 aaKnown RBP20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 HEATR6Q6AI08 1181 aaKnown RBP20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 MAMSTRQ6ZN01 415 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 PIK3AP1Q6ZUJ8 805 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 ANKS3Q6ZW76 656 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 CEP68Q76N32 757 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 TCEAL4Q96EI5 215 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 PRIMPOLQ96LW4 560 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 ADPGKQ9BRR6 497 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 AGXT2Q9BYV1 514 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 CXCL16Q9H2A7 254 aa20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 ZNF334Q9HCZ1 680 aaPredicted RBP20.94■□□□□ 0.94
NCKIPSD-209ENST00000470006 A0A087WWV3 80 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 I3L4J1 428 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 HRO43593 1189 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 TRAPPC3O43617 180 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 PSMC3P17980 439 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 FCARP24071 287 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 SPIRE1Q08AE8 756 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 STK3Q13188 491 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 AASDHQ4L235 1098 aaPredicted RBP20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 POTEHQ6S545 545 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 PDZD4Q76G19 769 aaPredicted RBP20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 ZNF687Q8N1G0 1237 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 PIGOQ8TEQ8 1089 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 PDZD7Q9H5P4 517 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 AVENQ9NQS1 362 aaPredicted RBP20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 BACE2Q9Y5Z0 518 aa20.93■□□□□ 0.94
NCKIPSD-209ENST00000470006 ZNF263O14978 683 aa20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 FOXD2O60548 495 aaPredicted RBP20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 CCNE1P24864 410 aa20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 CLCNKBP51801 687 aa20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 PRPF4BQ13523 1007 aaKnown RBP20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 GLRA4Q5JXX5 417 aa20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 CYP4A22Q5TCH4 519 aa20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 FAM177A1Q8N128 213 aaPredicted RBP20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 ELMOD1Q8N336 334 aa20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 KCNB2Q92953 911 aa20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 LARP6Q9BRS8 491 aaKnown RBP20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 CYP4F11Q9HBI6 524 aa20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 GPRC5CQ9NQ84 441 aa20.92■□□□□ 0.94
NCKIPSD-209ENST00000470006 IGFBP6P24592 240 aaPredicted RBP20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 HSPA4P34932 840 aa20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 CNR2P34972 360 aa20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 RARRES1P49788 294 aa20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 NAB2Q15742 525 aa20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 PRSS36Q5K4E3 855 aa20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 PPP4R3CPQ6ZMV5 832 aa20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 ZNF461Q8TAF7 563 aa20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 CSGALNACT1Q8TDX6 532 aa20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 DDX27Q96GQ7 796 aaKnown RBP20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 ASB16Q96NS5 453 aa20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 PCDHA12Q9UN75 941 aa20.91■□□□□ 0.94
NCKIPSD-209ENST00000470006 USP20Q9Y2K6 914 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms