RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 COLGALT1Q8NBJ5 622 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 RDH13Q8NBN7 331 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 GLIS3Q8NEA6 775 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 GPT2Q8TD30 523 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 MICAL1Q8TDZ2 1067 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 LRCH3Q96II8 777 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 ANKRD36BP1Q96IX9 119 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 ZNF560Q96MR9 790 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 C17orf80Q9BSJ5 609 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 MKNK1Q9BUB5 465 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 NAT10Q9H0A0 1025 aaKnown RBP6.92□□□□□ -1.3
SF3B1-206ENST00000462613 NRDE2Q9H7Z3 1164 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 CERS4Q9HA82 394 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 RNF19AQ9NV58 838 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 CNTN3Q9P232 1028 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 TRAF3IP3Q9Y228 551 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 SSX2IPQ9Y2D8 614 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 PRG3Q9Y2Y8 225 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-206ENST00000462613 NUB1Q9Y5A7 615 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 ATG2AQ2TAZ0 1938 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 CASTOR2A6NHX0 329 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 LACTBL1A8MY62 500 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 TISP43B9A030 160 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 H3BNC9 293 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 SOX1O00570 391 aaPredicted RBP6.91□□□□□ -1.3
SF3B1-206ENST00000462613 PTGESO14684 152 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 MAPK13O15264 365 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 STX10O60499 249 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 PHACTR2O75167 634 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 TADA2AO75478 443 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 FGF18O76093 207 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 B3GAT3O94766 335 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 GNA14O95837 355 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 GALTP07902 379 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 DLATP10515 647 aaKnown RBP6.91□□□□□ -1.3
SF3B1-206ENST00000462613 CYP3A5P20815 502 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 IGFBP4P22692 258 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 ADSSP30520 456 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 PSMC2P35998 433 aaKnown RBP6.91□□□□□ -1.3
SF3B1-206ENST00000462613 PNPLA4P41247 253 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 FXR1P51114 621 aaKnown RBP eCLIP6.91□□□□□ -1.35e-11■■■■■ 30.3
SF3B1-206ENST00000462613 NLRP12P59046 1061 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 TFAMQ00059 246 aaKnown RBP6.91□□□□□ -1.3
SF3B1-206ENST00000462613 PLCB3Q01970 1234 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 DSC1Q08554 894 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 ENOX2Q16206 610 aaKnown RBP6.91□□□□□ -1.3
SF3B1-206ENST00000462613 STX1AQ16623 288 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 CCDC40Q4G0X9 1142 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 TIGD5Q53EQ6 642 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 XKR4Q5GH76 650 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 CENPPQ6IPU0 288 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 PDXDC1Q6P996 788 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 ELMSAN1Q6PJG2 1045 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 FOXR2Q6PJQ5 311 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 TMC7Q7Z402 723 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 WDR49Q8IV35 697 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 FAM114A1Q8IWE2 563 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 COLGALT2Q8IYK4 626 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 ADSSL1Q8N142 457 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 SLC39A11Q8N1S5 342 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 CSGALNACT2Q8N6G5 542 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 KLHL23Q8NBE8 558 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 CCDC150Q8NCX0 1101 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 TMEM174Q8WUU8 243 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 NELFBQ8WX92 580 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 CCDC127Q96BQ5 260 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 IGSF21Q96ID5 467 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 FBXL18Q96ME1 805 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 FAM161BQ96MY7 647 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 PPP1R10Q96QC0 940 aaKnown RBP6.91□□□□□ -1.3
SF3B1-206ENST00000462613 IMPG2Q9BZV3 1241 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 KCTD10Q9H3F6 313 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 SEMA6BQ9H3T3 888 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 CWH43Q9H720 699 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 METTL14Q9HCE5 456 aaKnown RBP6.91□□□□□ -1.3
SF3B1-206ENST00000462613 ENTPD7Q9NQZ7 604 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 TLR9Q9NR96 1032 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 ANO10Q9NW15 660 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 LMCD1Q9NZU5 365 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 ADAM28Q9UKQ2 775 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 CTNND2Q9UQB3 1225 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 LZTS1Q9Y250 596 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 SF3B1O75533 1304 aaKnown RBP eCLIP6.91□□□□□ -1.3
SF3B1-206ENST00000462613 VWA8A3KMH1 1905 aa6.91□□□□□ -1.3
SF3B1-206ENST00000462613 TMEM189-UBE2V1I3L0A0 370 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 PODXLO00592 558 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 NRP1O14786 923 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 SLC16A3O15427 465 aaKnown RBP6.9□□□□□ -1.3
SF3B1-206ENST00000462613 FAM189A1O60320 539 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 DDHD2O94830 711 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 URODP06132 367 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 TPM2P07951 284 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 KRT19P08727 400 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 SRGAP2BP0DMP2 458 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 CCDC192P0DO97 292 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 FOSL2P15408 326 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 TRIM21P19474 475 aaKnown RBP6.9□□□□□ -1.3
SF3B1-206ENST00000462613 ERCC5P28715 1186 aaPredicted RBP6.9□□□□□ -1.3
SF3B1-206ENST00000462613 HOXD13P35453 343 aa6.9□□□□□ -1.3
SF3B1-206ENST00000462613 SLC11A1P49279 550 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms