RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 RAB20Q9NX57 234 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 PSMC4P43686 418 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 HADHBP55084 474 aaKnown RBP20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 KLHL29Q96CT2 875 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 FAM212AQ96EL1 285 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 TAAR1Q96RJ0 339 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 STMN4Q9H169 189 aaPredicted RBP20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 KIF9Q9HAQ2 790 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 KCND2Q9NZV8 630 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 YDJCA8MPS7 323 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 ZSCAN5DPP0CG00 497 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 GHRP10912 638 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 GZMAP12544 262 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 NCALDP61601 193 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 ITIH4Q14624 930 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 SPDYCQ5MJ68 293 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 ANKS1BQ7Z6G8 1248 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 RUNDC3BQ96NL0 473 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 NINJ2Q9NZG7 142 aa20.88■□□□□ 0.93
CNEP1R1-203ENST00000458059 ASTN2O75129 1339 aaPredicted RBP20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 AFF2P51816 1311 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 HNRNPDLO14979 420 aaKnown RBP20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 KRT10P13645 584 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 NPTX2P47972 431 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 CLNS1AP54105 237 aaKnown RBP20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 NAA25Q14CX7 972 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 ACAD10Q6JQN1 1059 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 B3GNT9Q6UX72 402 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 FBXL13Q8NEE6 735 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 AGAP11Q8TF27 550 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 SNF8Q96H20 258 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 POC1B-GALNT4F8VUJ3 575 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 KRT16P08779 473 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 CYP1B1Q16678 543 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 CYFIP1Q7L576 1253 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 FITM2Q8N6M3 262 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 GLIS1Q8NBF1 620 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 ZNF341Q9BYN7 854 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 TBX20Q9UMR3 447 aa20.87■□□□□ 0.93
CNEP1R1-203ENST00000458059 ANKRD31Q8N7Z5 1873 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 TTC4O95801 387 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 ETS1P14921 441 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 RIT2Q99578 217 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 MROH7Q68CQ1 1323 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 SKAP2O75563 359 aaPredicted RBP20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 GGPS1O95749 300 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 HARSP12081 509 aaKnown RBP20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 CLUL1Q15846 466 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 ZNF365Q70YC5 407 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 KCNV2Q8TDN2 545 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 DDX1Q92499 740 aaKnown RBP20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 LRRC19Q9H756 370 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 AGO4Q9HCK5 861 aaKnown RBP20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 KMT5AQ9NQR1 393 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 NAALADL1Q9UQQ1 740 aa20.86■□□□□ 0.93
CNEP1R1-203ENST00000458059 TAS2R40P59535 323 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 GTF2BQ00403 316 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 SEZ6Q53EL9 994 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 SCARA3Q6AZY7 606 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 NLGN1Q8N2Q7 840 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 A1CFQ9NQ94 594 aaKnown RBP20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 GRIN3BO60391 1043 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 ENTPD3O75355 529 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 SUN1O94901 812 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 CCNE2O96020 404 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 TCF4P15884 667 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 ATF7P17544 494 aaPredicted RBP20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 SLC39A4Q6P5W5 647 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 TRMT10CQ7L0Y3 403 aaKnown RBP20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 SPATA21Q7Z572 469 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 NSMCE1Q8WV22 266 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 SPATA31A6Q5VVP1 1343 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 GOLGA8SH3BPF8 625 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 GOLGA8MH3BSY2 632 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 GAS8O95995 478 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 TNNI1P19237 187 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 IVDP26440 423 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 ACOT2P49753 483 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 WNT7BP56706 349 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 WLSQ5T9L3 541 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 IZUMO3Q5VZ72 239 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 KIFAP3Q92845 792 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 DCLK3Q9C098 648 aa20.85■□□□□ 0.93
CNEP1R1-203ENST00000458059 SLX4Q8IY92 1834 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 FSCN2O14926 492 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 C21orf2O43822 256 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 BANF1O75531 89 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 NQO1P15559 274 aaKnown RBP20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 DMP1Q13316 513 aaPredicted RBP20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 CLEC16AQ2KHT3 1053 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 C4orf33Q8N1A6 199 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 TMEM161BQ8NDZ6 487 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 LBHD1Q9BQE6 289 aaPredicted RBP20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 C10orf88Q9H8K7 445 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 UVRAGQ9P2Y5 699 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 NRXN2Q9P2S2 1712 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 ADGRA3Q8IWK6 1321 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 RASA4BC9J798 803 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 RASA4O43374 803 aa20.84■□□□□ 0.93
CNEP1R1-203ENST00000458059 RNASELQ05823 741 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms