RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RPUSD3Q6P087 351 aaKnown RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 ZNF771Q7L3S4 317 aaPredicted RBP8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CHST3Q7LGC8 479 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CCDC91Q7Z6B0 441 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 GALNT7Q86SF2 657 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CCDC144CPQ8IYA2 1237 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 RNF139Q8WU17 664 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 SDR42E1Q8WUS8 393 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 TNFRSF25Q93038 417 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CFAP36Q96G28 342 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CHAMP1Q96JM3 812 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 YME1L1Q96TA2 773 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 HPF1Q9NWY4 346 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 CALCOCO1Q9P1Z2 691 aa8.41□□□□□ -1.06
BRCC3-208ENST00000453705 H7C0S8 307 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 KPNA5O15131 536 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 ZBTB14O43829 449 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 SNUPNO95149 360 aaKnown RBP8.4□□□□□ -1.06
BRCC3-208ENST00000453705 ADRB2P07550 413 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 CCDC192P0DO97 292 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 STMN1P16949 149 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 IRX1P78414 480 aaPredicted RBP8.4□□□□□ -1.06
BRCC3-208ENST00000453705 MRPS5P82675 430 aaKnown RBP8.4□□□□□ -1.06
BRCC3-208ENST00000453705 DEUP1Q05D60 604 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 GNPTABQ3T906 1256 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 SEZ6Q53EL9 994 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 PPFIBP1Q86W92 1011 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 FMR1NBQ8N0W7 255 aaPredicted RBP8.4□□□□□ -1.06
BRCC3-208ENST00000453705 SYNPOQ8N3V7 929 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 OR6C4Q8NGE1 309 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 MOSPD2Q8NHP6 518 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 NEDD1Q8NHV4 660 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 CNKSR1Q969H4 720 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 ZPBPQ9BS86 351 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 PHF20Q9BVI0 1012 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 AGO4Q9HCK5 861 aaKnown RBP8.4□□□□□ -1.06
BRCC3-208ENST00000453705 UBN1Q9NPG3 1134 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 MAP10Q9P2G4 905 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 PNMA3Q9UL41 463 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 PTPN22Q9Y2R2 807 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 PCDHGC5Q9Y5F6 944 aa8.4□□□□□ -1.06
BRCC3-208ENST00000453705 DICER1Q9UPY3 1922 aaKnown RBP8.4□□□□□ -1.06
BRCC3-208ENST00000453705 CUTAO60888 179 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 SMC2O95347 1197 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 CYP11B2P19099 503 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 HSD17B2P37059 387 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 KCNJ6P48051 423 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 RPS26P11Q5JNZ5 115 aaPredicted RBP8.4□□□□□ -1.07
BRCC3-208ENST00000453705 PCYOX1LQ8NBM8 494 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 SUPT20HQ8NEM7 779 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 MRPS27Q92552 414 aaKnown RBP8.4□□□□□ -1.07
BRCC3-208ENST00000453705 RIPOR3Q96MK2 946 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 TRIM7Q9C029 511 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 VEZTQ9HBM0 779 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 STIM2Q9P246 746 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 MAP4K5Q9Y4K4 846 aa8.4□□□□□ -1.07
BRCC3-208ENST00000453705 KIF28PB7ZC32 967 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 LTFP02788 710 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 PDHA1P08559 390 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 CYP2A6P11509 494 aaPredicted RBP8.39□□□□□ -1.07
BRCC3-208ENST00000453705 ADSLP30566 484 aaPredicted RBP8.39□□□□□ -1.07
BRCC3-208ENST00000453705 SULT1E1P49888 294 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 R3HDM1Q15032 1099 aaKnown RBP8.39□□□□□ -1.07
BRCC3-208ENST00000453705 IFIT1BQ5T764 474 aaKnown RBP8.39□□□□□ -1.07
BRCC3-208ENST00000453705 PEX5LQ8IYB4 626 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 SEPT1Q8WYJ6 367 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 CCDC114Q96M63 670 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 SORBS1Q9BX66 1292 aaKnown RBP8.39□□□□□ -1.07
BRCC3-208ENST00000453705 SIRT5Q9NXA8 310 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 AATFQ9NY61 560 aaKnown RBP eCLIP8.39□□□□□ -1.07
BRCC3-208ENST00000453705 AKAP7Q9P0M2 348 aaPredicted RBP8.39□□□□□ -1.07
BRCC3-208ENST00000453705 SSX2IPQ9Y2D8 614 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 ATRNL1Q5VV63 1379 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 DNAJC25-GNG10A0A024R161 153 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 KCNH1O95259 989 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 CCND1P24385 295 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 MAPK4P31152 587 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 MBTPS1Q14703 1052 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 SYCP1Q15431 976 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 STRIP1Q5VSL9 837 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 WDR73Q6P4I2 378 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 LRRC71Q8N4P6 559 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 OR2C3Q8N628 320 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 SH3RF3Q8TEJ3 882 aaPredicted RBP8.39□□□□□ -1.07
BRCC3-208ENST00000453705 FNBP1Q96RU3 617 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 SPZ1Q9BXG8 430 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 TXLNGYQ9BZA5 131 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 TRIT1Q9H3H1 467 aaKnown RBP8.39□□□□□ -1.07
BRCC3-208ENST00000453705 HAUS2Q9NVX0 235 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 FLT1P17948 1338 aa8.39□□□□□ -1.07
BRCC3-208ENST00000453705 INO80B-WBP1J3KQ70 363 aa8.38□□□□□ -1.07
BRCC3-208ENST00000453705 IRAK2O43187 625 aa8.38□□□□□ -1.07
BRCC3-208ENST00000453705 ZBTB48P10074 688 aaPredicted RBP8.38□□□□□ -1.07
BRCC3-208ENST00000453705 YY1P25490 414 aa8.38□□□□□ -1.07
BRCC3-208ENST00000453705 CDC25BP30305 580 aa8.38□□□□□ -1.07
BRCC3-208ENST00000453705 BTDP43251 543 aa8.38□□□□□ -1.07
BRCC3-208ENST00000453705 GRB10Q13322 594 aa8.38□□□□□ -1.07
BRCC3-208ENST00000453705 ZNF674Q2M3X9 581 aa8.38□□□□□ -1.07
BRCC3-208ENST00000453705 RESP18Q5W5W9 173 aa8.38□□□□□ -1.07
BRCC3-208ENST00000453705 SARM1Q6SZW1 724 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms