RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 XYLT1Q86Y38 959 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 KLHDC4Q8TBB5 520 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 FBXO41Q8TF61 875 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 CDK5RAP3Q96JB5 506 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 MYOCQ99972 504 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 TMEM60Q9H2L4 133 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 SLC23A1Q9UHI7 598 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 RUVBL1Q9Y265 456 aaKnown RBP6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 STXBP5LQ9Y2K9 1186 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 NR2E3Q9Y5X4 410 aa6.3□□□□□ -1.4
HMGB1P26-201ENST00000452520 B5MCH6 92 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 PJA2O43164 708 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 FOSP01100 380 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 ITGB3P05106 788 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 RAP2AP10114 183 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 SMARCA1P28370 1054 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 IL12RB1P42701 662 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 NEK3P51956 506 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 USP14P54578 494 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 GALEQ14376 348 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 BMT2Q1RMZ1 405 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 IL31Q6EBC2 164 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 SPOCD1Q6ZMY3 1216 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 DOK3Q7L591 496 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 GPRIN1Q7Z2K8 1008 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 HEATR3Q7Z4Q2 680 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 ELOA2Q8IYF1 753 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 CPPED1Q9BRF8 314 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 SARGQ9BW04 601 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 LSM14BQ9BX40 385 aaKnown RBP6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 FAM204AQ9H8W3 233 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 TAGLN3Q9UI15 199 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 HDAC5Q9UQL6 1122 aa6.29□□□□□ -1.4
HMGB1P26-201ENST00000452520 A0A088AWK7 358 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 A0A0G2JLL6 359 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 PATE3B3GLJ2 98 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 MFAP3LO75121 409 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 SNRPA1P09661 255 aaKnown RBP6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 NBPF7P0C2Y1 421 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 GNAT2P19087 354 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 AGFG1P52594 562 aaKnown RBP6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 CLRN1P58418 232 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 NKX6-1P78426 367 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 CREMQ03060 361 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 ELAVL1Q15717 326 aaKnown RBP6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 DACT2Q5SW24 774 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 NPNTQ6UXI9 565 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 SEM1Q6ZVN7 128 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 SRGAP1Q7Z6B7 1085 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 DAAM2Q86T65 1068 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 PLXDC1Q8IUK5 500 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 KIAA0319LQ8IZA0 1049 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 SPICE1Q8N0Z3 855 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 FAM43AQ8N2R8 423 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 D2HGDHQ8N465 521 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 DCBLD1Q8N8Z6 715 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 DNERQ8NFT8 737 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 PLBD2Q8NHP8 589 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 ST8SIA2Q92186 375 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 LMBRD1Q9NUN5 540 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 RTEL1Q9NZ71 1219 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 ABCF2Q9UG63 623 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 USP25Q9UHP3 1055 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 L1RE1Q9UN81 338 aa6.28□□□□□ -1.4
HMGB1P26-201ENST00000452520 NT5C1B-RDH14C9J2C7 533 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 H3BUI4 141 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 HRGP04196 525 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 TYRP14679 529 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 ATP5JP18859 108 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 PICALMQ13492 652 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 ZRSR2Q15696 482 aaKnown RBP6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 CSRP2Q16527 193 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 ATP2B3Q16720 1220 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 ANO6Q4KMQ2 910 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 FLYWCH1Q4VC44 716 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 SPTY2D1Q68D10 685 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 Q6ZSN1 163 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 TTLL10Q6ZVT0 673 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 POLNQ7Z5Q5 900 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 SH2D3CQ8N5H7 860 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 IL17RDQ8NFM7 739 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 MDGA1Q8NFP4 955 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 PJA1Q8NG27 643 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 Q8TCH9 128 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 FAM167AQ96KS9 214 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 C20orf173Q96LM9 149 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 B3GNT5Q9BYG0 378 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 C11orf54Q9H0W9 315 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 ARMT1Q9H993 441 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 PNPOQ9NVS9 261 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
HMGB1P26-201ENST00000452520 TCRBV7S2A1N4TA0A589 114 aa6.26□□□□□ -1.41
HMGB1P26-201ENST00000452520 FAM227AF5H4B4 570 aa6.26□□□□□ -1.41
HMGB1P26-201ENST00000452520 F2RL2O00254 374 aa6.26□□□□□ -1.41
HMGB1P26-201ENST00000452520 TPP1O14773 563 aa6.26□□□□□ -1.41
HMGB1P26-201ENST00000452520 GRM6O15303 877 aa6.26□□□□□ -1.41
HMGB1P26-201ENST00000452520 ZNF623O75123 536 aa6.26□□□□□ -1.41
HMGB1P26-201ENST00000452520 ZBED1O96006 694 aa6.26□□□□□ -1.41
HMGB1P26-201ENST00000452520 SBK3P0C264 359 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms