RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 SNX17Q15036 470 aa7.8□□□□□ -1.16
LSM8-204ENST00000424702 ZFYVE27Q5T4F4 411 aa7.8□□□□□ -1.16
LSM8-204ENST00000424702 KRT39Q6A163 491 aa7.8□□□□□ -1.16
LSM8-204ENST00000424702 SLC39A5Q6ZMH5 540 aa7.8□□□□□ -1.16
LSM8-204ENST00000424702 IPO4Q8TEX9 1081 aaKnown RBP7.8□□□□□ -1.16
LSM8-204ENST00000424702 TMEM169Q96HH4 297 aa7.8□□□□□ -1.16
LSM8-204ENST00000424702 MMS19Q96T76 1030 aa7.8□□□□□ -1.16
LSM8-204ENST00000424702 CBWD1Q9BRT8 395 aa7.8□□□□□ -1.16
LSM8-204ENST00000424702 INTS2Q9H0H0 1204 aaKnown RBP7.8□□□□□ -1.16
LSM8-204ENST00000424702 UBE2TQ9NPD8 197 aaPredicted RBP7.8□□□□□ -1.16
LSM8-204ENST00000424702 DPP7Q9UHL4 492 aa7.8□□□□□ -1.16
LSM8-204ENST00000424702 ADGRG1Q9Y653 693 aa7.8□□□□□ -1.16
LSM8-204ENST00000424702 SLC4A7Q9Y6M7 1214 aa7.8□□□□□ -1.16
LSM8-204ENST00000424702 USP27XA6NNY8 438 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 CD19P15391 556 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 GTF2H1P32780 548 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 TRIM60Q495X7 471 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 ZCWPW2Q504Y3 356 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 SERINC5Q86VE9 423 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 APPL2Q8NEU8 664 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 TMC2Q8TDI7 906 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 ADAM2Q99965 735 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 C16orf70Q9BSU1 422 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 PLEKHA5Q9HAU0 1116 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 UMODL1Q5DID0 1318 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 TMCO5BA8MYB1 307 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 LRRN2O75325 713 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 GFPT2O94808 682 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 SLC9A1P19634 815 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 DNA2P51530 1060 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 NCKAP1LP55160 1127 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 MTF1Q14872 753 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 B3GNT9Q6UX72 402 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 EPM2AIP1Q7L775 607 aaPredicted RBP7.79□□□□□ -1.16
LSM8-204ENST00000424702 CTNNBL1Q8WYA6 563 aaPredicted RBP7.79□□□□□ -1.16
LSM8-204ENST00000424702 ABHD8Q96I13 439 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 CHP1Q99653 195 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 NFKBIZQ9BYH8 718 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 RSAD1Q9HA92 442 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 MYO1AQ9UBC5 1043 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 GIT1Q9Y2X7 761 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 H7C4K7 107 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 RIOK3O14730 519 aaKnown RBP7.79□□□□□ -1.16
LSM8-204ENST00000424702 TGFB1I1O43294 461 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 MED7O43513 233 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 HOXD8P13378 290 aaPredicted RBP7.79□□□□□ -1.16
LSM8-204ENST00000424702 UCHL3P15374 230 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 VASPP50552 380 aaPredicted RBP7.79□□□□□ -1.16
LSM8-204ENST00000424702 CYP27A1Q02318 531 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 CREMQ03060 361 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 TUBB2AQ13885 445 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 ZNF699Q32M78 642 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 MIIPQ5JXC2 388 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 FGD4Q96M96 766 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 TUBB2BQ9BVA1 445 aa7.79□□□□□ -1.16
LSM8-204ENST00000424702 PAK6Q9NQU5 681 aaPredicted RBP7.79□□□□□ -1.16
LSM8-204ENST00000424702 MAPK13O15264 365 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 ADCY6O43306 1168 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 CCL23P55773 120 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 CKAP4Q07065 602 aaKnown RBP7.78□□□□□ -1.16
LSM8-204ENST00000424702 BTG3Q14201 252 aaPredicted RBP7.78□□□□□ -1.16
LSM8-204ENST00000424702 TEX35Q5T0J7 233 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 TMEM161BQ8NDZ6 487 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 DNAJC7Q99615 494 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 DSEQ9UL01 958 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 ST3GAL5Q9UNP4 418 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 EIF3CLB5ME19 914 aaKnown RBP7.78□□□□□ -1.16
LSM8-204ENST00000424702 BAIAP3O94812 1187 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 UPP2O95045 317 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 H2AFZP0C0S5 128 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 RDXP35241 583 aaKnown RBP7.78□□□□□ -1.16
LSM8-204ENST00000424702 PBX1P40424 430 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 ALDH7A1P49419 539 aaKnown RBP7.78□□□□□ -1.16
LSM8-204ENST00000424702 VAV2P52735 878 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 RAB30Q15771 203 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 GDF6Q6KF10 455 aaPredicted RBP7.78□□□□□ -1.16
LSM8-204ENST00000424702 RAD9BQ6WBX8 426 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 H2AFVQ71UI9 128 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 SLC9A9Q8IVB4 645 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 KIAA0319LQ8IZA0 1049 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 CEP112Q8N8E3 955 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 FBXL13Q8NEE6 735 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 TRPV1Q8NER1 839 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 TRIM58Q8NG06 486 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 MICAL1Q8TDZ2 1067 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 GCNAQ96QF7 691 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 EIF3CQ99613 913 aaKnown RBP7.78□□□□□ -1.16
LSM8-204ENST00000424702 CGRRF1Q99675 332 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 MED10Q9BTT4 135 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 EHD2Q9NZN4 543 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 ZNF646O15015 1829 aaPredicted RBP7.78□□□□□ -1.16
LSM8-204ENST00000424702 GTPBP10A4D1E9 387 aaKnown RBP7.78□□□□□ -1.16
LSM8-204ENST00000424702 HAS3O00219 553 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 TADA2AO75478 443 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 THP07101 528 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 ACOT2P49753 483 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 PDE6CP51160 858 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 TERF1P54274 439 aa7.78□□□□□ -1.16
LSM8-204ENST00000424702 MARSP56192 900 aaKnown RBP7.78□□□□□ -1.16
LSM8-204ENST00000424702 LIN9Q5TKA1 542 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms