RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZFP28Q8NHY6 868 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 NSUN6Q8TEA1 469 aaKnown RBP5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 ZNF341Q9BYN7 854 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 TCF7L1Q9HCS4 588 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 TDP1Q9NUW8 608 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 TRPM5Q9NZQ8 1165 aa5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P49-201ENST00000418882 ITGB1P05556 798 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 PF4V1P10720 104 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 PDCP20941 246 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 CTXN1P60606 82 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 TLE1Q04724 770 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 PIN1Q13526 163 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 FLYWCH1Q4VC44 716 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 LRRC55Q6ZSA7 311 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 MED25Q71SY5 747 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 GDF7Q7Z4P5 450 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 ZFPM1Q8IX07 1006 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 PRR18Q8N4B5 295 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 ZNF276Q8N554 614 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 HSPBAP1Q96EW2 488 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 KRTAP4-2Q9BYR5 136 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 GTPBP4Q9BZE4 634 aaKnown RBP5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 MMRN2Q9H8L6 949 aa5.9□□□□□ -1.46
HMGB1P49-201ENST00000418882 SGTAO43765 313 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 NCR1O76036 304 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 IL33O95760 270 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 POU2F2P09086 479 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 UBXN2BQ14CS0 331 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 DACT2Q5SW24 774 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 ODR4Q5SWX8 454 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 AGAP9Q5VTM2 703 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 RHOUQ7L0Q8 258 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 DRC7Q8IY82 874 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 MIER2Q8N344 545 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 SLC25A43Q8WUT9 341 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 CLPTM1LQ96KA5 538 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 VRK1Q99986 396 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 ZSWIM1Q9BR11 485 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 C11orf54Q9H0W9 315 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 CLCA2Q9UQC9 943 aa5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 USP15Q9Y4E8 981 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P49-201ENST00000418882 KIAA0391O15091 583 aaKnown RBP5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 LPXNO60711 386 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 ZNF202O95125 648 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 POMCP01189 267 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 ELANEP08246 267 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 LRRC41Q15345 812 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 RSPH3Q86UC2 560 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 CEP89Q96ST8 783 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 MLST8Q9BVC4 326 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 KLHL11Q9NVR0 708 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 FAM30AQ9NZY2 134 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 ING1Q9UK53 422 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 SLC45A2Q9UMX9 530 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 MAP3K2Q9Y2U5 619 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 HS3ST3A1Q9Y663 406 aa5.88□□□□□ -1.47
HMGB1P49-201ENST00000418882 CDHR4A6H8M9 788 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 MARCH11A6NNE9 402 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 GRM6O15303 877 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 TEX33O43247 280 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 MGAT1P26572 445 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 ACVRL1P37023 503 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 NOMO3P69849 1222 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 SLFN5Q08AF3 891 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 KLF10Q13118 480 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 SNAPC2Q13487 334 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 ZNF267Q14586 743 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 KHDC1Q4VXA5 237 aaKnown RBP5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 NOMO2Q5JPE7 1267 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 Q6ZPA2 131 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 USP45Q70EL2 814 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 TPH2Q8IWU9 490 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 RHOT2Q8IXI1 618 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 OR56A1Q8NGH5 318 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 ZNF483Q8TF39 744 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 CLIP3Q96DZ5 547 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 ADAM2Q99965 735 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 SLC46A2Q9BY10 475 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 CDH19Q9H159 772 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 SLC12A5Q9H2X9 1139 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 GSTO2Q9H4Y5 243 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 NRDE2Q9H7Z3 1164 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 VSX1Q9NZR4 365 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 DKK2Q9UBU2 259 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 HS3ST4Q9Y661 456 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 CFAP20Q9Y6A4 193 aaKnown RBP5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 AATKQ6ZMQ8 1374 aa5.87□□□□□ -1.47
HMGB1P49-201ENST00000418882 NT5C1B-RDH14C9J2C7 533 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 PRPF3O43395 683 aaKnown RBP5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 FSHBP01225 129 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 SLPIP03973 132 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 CD1AP06126 327 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 OCA2Q04671 838 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 BEAN1Q3B7T3 259 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 TSHZ3Q63HK5 1081 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 ZNF627Q7L945 461 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 MRGPREQ86SM8 312 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 SLC16A11Q8NCK7 471 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 JPH3Q8WXH2 748 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms