RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 SCNN1GP51170 649 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 NOVA1P51513 510 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 LIMK1P53667 647 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 MARSP56192 900 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 PTH1RQ03431 593 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 ZNF252P-AS1Q0IIN9 211 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 WWC2Q6AWC2 1192 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 MRPL10Q7Z7H8 261 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 KBTBD6Q86V97 674 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 PLA2G4DQ86XP0 818 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 ZNF654Q8IZM8 581 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 ZCCHC14Q8WYQ9 949 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 MBOAT7Q96N66 472 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 GAD1Q99259 594 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 CLSTN3Q9BQT9 956 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 PAAF1Q9BRP4 392 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 TMEM175Q9BSA9 504 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 DSCC1Q9BVC3 393 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 TRAIPQ9BWF2 469 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 FAM126AQ9BYI3 521 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 PLEKHA4Q9H4M7 779 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 RSAD1Q9HA92 442 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 FKBPLQ9UIM3 349 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 FBXW11Q9UKB1 542 aa9.73□□□□□ -0.85
NIF3L1-206ENST00000416651 MAGEB2O15479 319 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 EDIL3O43854 480 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 CEBPBP17676 345 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 HOXA11P31270 313 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 CXCL12P48061 93 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 PRKCEQ02156 737 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 DSC1Q08554 894 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 TARBP2Q15633 366 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 PKN3Q6P5Z2 889 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 FAM43BQ6ZT52 329 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 HEATR3Q7Z4Q2 680 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 VWA5B2Q8N398 1253 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 HDAC7Q8WUI4 952 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 DDX1Q92499 740 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 TCEAL4Q96EI5 215 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 FAM193BQ96PV7 902 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 NELL2Q99435 816 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 EIF2AQ9BY44 585 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 GCOM2Q9BZD3 368 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 CXCL16Q9H2A7 254 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 CHMP4BQ9H444 224 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 CNNM2Q9H8M5 875 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 CHST12Q9NRB3 414 aa9.72□□□□□ -0.85
NIF3L1-206ENST00000416651 C4orf47A7E2U8 309 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 E7EWF7 191 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 IPO5O00410 1097 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 NCAM2O15394 837 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 C8AP07357 584 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 ZNF806P0C7X5 589 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 MLH1P40692 756 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 NRLP54845 237 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 PFKPQ01813 784 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 MTERF2Q49AM1 385 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 JAKMIP3Q5VZ66 844 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 FUT10Q6P4F1 479 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 MTSS1LQ765P7 747 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 CEP68Q76N32 757 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 CATSPER4Q7RTX7 472 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 CATIPQ7Z7H3 387 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 RHPN2Q8IUC4 686 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 TTC8Q8TAM2 541 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 URGCPQ8TCY9 931 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 HASPINQ8TF76 798 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 LRRN4Q8WUT4 740 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 ZSWIM3Q96MP5 696 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 ARHGAP9Q9BRR9 750 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 LNPKQ9C0E8 428 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 KDM4CQ9H3R0 1056 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 SEC63Q9UGP8 760 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 ZFP37Q9Y6Q3 630 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 EML5Q05BV3 1969 aa9.71□□□□□ -0.86
NIF3L1-206ENST00000416651 SPAG17Q6Q759 2223 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 SLC35F4A4IF30 521 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 HYAL3O43820 417 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 CCNE1P24864 410 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 TMOD1P28289 359 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 ZNF76P36508 570 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 SREBF1P36956 1147 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 CCR2P41597 374 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 CCR3P51677 355 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 MFAP1P55081 439 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 PPM1LQ5SGD2 360 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 TXNDC11Q6PKC3 985 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 LONP2Q86WA8 852 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 MB21D2Q8IYB1 491 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 C12orf50Q8NA57 414 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 GSTCDQ8NEC7 633 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 SLC7A14Q8TBB6 771 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 CRYGNQ8WXF5 182 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 FAM3CQ92520 227 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 RSPRY1Q96DX4 576 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 NLRP4Q96MN2 994 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 APOL6Q9BWW8 343 aa9.7□□□□□ -0.86
NIF3L1-206ENST00000416651 IFT122Q9HBG6 1241 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms