RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ATP8B2P98198 1209 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 KCNV1Q6PIU1 500 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 MED25Q71SY5 747 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 RPUSD2Q8IZ73 545 aaKnown RBP4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 PPM1NQ8N819 430 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 RNF169Q8NCN4 708 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 ZCRB1Q8TBF4 217 aaKnown RBP4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 DPF2Q92785 391 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 BRINP2Q9C0B6 783 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 REXO4Q9GZR2 422 aaKnown RBP4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 PCDH12Q9NPG4 1184 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 AJAP1Q9UKB5 411 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 INTUQ9ULD6 942 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 USP15Q9Y4E8 981 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 PCDHGA9Q9Y5G4 932 aaKnown RBP4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 PCDHGA8Q9Y5G5 932 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 PCDHGA7Q9Y5G6 932 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 PCDHGA6Q9Y5G7 932 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 PCDHGA3Q9Y5H0 932 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 FPGT-TNNI3KV9GXZ4 949 aa4.83□□□□□ -1.64
HMGB3P23-201ENST00000414981 MYBBP1AQ9BQG0 1328 aaKnown RBP4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 CENPVL1A0A0U1RR11 272 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 FZD9O00144 591 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 RAMP2O60895 175 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 RHOBTB3O94955 611 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 NDUFA10O95299 355 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 AMY1AP04745 511 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 MYBL2P10244 700 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 IARSP41252 1262 aaKnown RBP4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 ALDH1A3P47895 512 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 SLC16A1P53985 500 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 MTM1Q13496 603 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 FBXO18Q8NFZ0 1043 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 CCHCR1Q8TD31 782 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 MLST8Q9BVC4 326 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 TEX101Q9BY14 249 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 SLC13A1Q9BZW2 595 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 CCDC8Q9H0W5 538 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 LDAHQ9H6V9 325 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 SLC23A1Q9UHI7 598 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 ACTL7AQ9Y615 435 aa4.82□□□□□ -1.64
HMGB3P23-201ENST00000414981 B3GALT2O43825 422 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 GPR32O75388 356 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 KATNA1O75449 491 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 GCP02774 474 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 CFIP05156 583 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 CKBP12277 381 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 DDCP20711 480 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 FPR1P21462 350 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 C5AR1P21730 350 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 PCSK1P29120 753 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 CTXN1P60606 82 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 RAP2BP61225 183 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 MXRA7P84157 204 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 ACAP2Q15057 778 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 PCBP2Q15366 365 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 DACT2Q5SW24 774 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 TSHZ3Q63HK5 1081 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 VRK3Q8IV63 474 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 FAM43AQ8N2R8 423 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 CPEB3Q8NE35 698 aaKnown RBP4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 NLGN4YQ8NFZ3 816 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 HDAC10Q969S8 669 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 NEU1Q99519 415 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 SERHL2Q9H4I8 314 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 KLHL11Q9NVR0 708 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 TUBD1Q9UJT1 453 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 COL4A3BPQ9Y5P4 624 aa4.81□□□□□ -1.64
HMGB3P23-201ENST00000414981 TNIKQ9UKE5 1360 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 PIPSLA2A3N6 862 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 MARCH11A6NNE9 402 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 SUV39H1O43463 412 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 SGTAO43765 313 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 MT-CO1P00395 513 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 ALAS1P13196 640 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 GCSHP23434 173 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 EVA1CP58658 441 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 GUCY1B3Q02153 619 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 RESTQ13127 1097 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 ATP2B3Q16720 1220 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 PPP4R3AQ6IN85 833 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 ZNF529Q6P280 563 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 PCSK4Q6UW60 755 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 MIGA2Q7L4E1 593 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 MAPKAPK5Q8IW41 473 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 RHOT1Q8IXI2 618 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 TMEM132CQ8N3T6 1108 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 ZGPATQ8N5A5 531 aaKnown RBP4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 OR56A1Q8NGH5 318 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 COA7Q96BR5 231 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 BOD1Q96IK1 185 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 CCDC136Q96JN2 1154 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 PKNOX2Q96KN3 472 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 PHACTR3Q96KR7 559 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 MYOCQ99972 504 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 TTPALQ9BTX7 342 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 TMEM74BQ9NUR3 256 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 PACSIN3Q9UKS6 424 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 IPPQ9Y573 584 aa4.8□□□□□ -1.64
HMGB3P23-201ENST00000414981 DMRT1Q9Y5R6 373 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms