RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 KIF12Q96FN5 646 aa33.2■■■□□ 2.91
CSNK1E-206ENST00000413574 GOLGA2P5Q9HBQ8 144 aa33.2■■■□□ 2.91
CSNK1E-206ENST00000413574 FKBP3Q00688 224 aaKnown RBP33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 POU5F1Q01860 360 aaKnown RBP33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 CYP24A1Q07973 514 aa33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 DSC1Q08554 894 aa33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 ZC3H3Q8IXZ2 948 aaKnown RBP33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 EFCAB13Q8IY85 973 aa33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 COLGALT2Q8IYK4 626 aa33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 PAAF1Q9BRP4 392 aa33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 ASB7Q9H672 318 aa33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 ANO10Q9NW15 660 aa33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 TUBGCP4Q9UGJ1 667 aa33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 FRMD4BQ9Y2L6 1034 aa33.2■■■□□ 2.9
CSNK1E-206ENST00000413574 CETN3O15182 167 aa33.19■■■□□ 2.9
CSNK1E-206ENST00000413574 LETM1O95202 739 aaPredicted RBP33.19■■■□□ 2.9
CSNK1E-206ENST00000413574 PLEKHO2Q8TD55 490 aa33.19■■■□□ 2.9
CSNK1E-206ENST00000413574 CCDC127Q96BQ5 260 aa33.19■■■□□ 2.9
CSNK1E-206ENST00000413574 MFSD14AQ96MC6 490 aa33.19■■■□□ 2.9
CSNK1E-206ENST00000413574 DACH1Q9UI36 760 aa33.19■■■□□ 2.9
CSNK1E-206ENST00000413574 CASTOR2A6NHX0 329 aa33.18■■■□□ 2.9
CSNK1E-206ENST00000413574 NT5C1B-RDH14C9J2C7 533 aa33.18■■■□□ 2.9
CSNK1E-206ENST00000413574 IL18RAPO95256 599 aa33.18■■■□□ 2.9
CSNK1E-206ENST00000413574 BCAR1P56945 870 aa33.18■■■□□ 2.9
CSNK1E-206ENST00000413574 LMBRD2Q68DH5 695 aaPredicted RBP33.18■■■□□ 2.9
CSNK1E-206ENST00000413574 CD302Q8IX05 232 aa33.18■■■□□ 2.9
CSNK1E-206ENST00000413574 GZF1Q9H116 711 aaPredicted RBP33.18■■■□□ 2.9
CSNK1E-206ENST00000413574 GUCY2FP51841 1108 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 ZBTB6Q15916 424 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 CSGALNACT2Q8N6G5 542 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 COLGALT1Q8NBJ5 622 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 POP1Q99575 1024 aaKnown RBP33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 DNAJC25Q9H1X3 360 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 PTPRJQ12913 1337 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 SLC11A1P49279 550 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 TUSC3Q13454 348 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 TMEM132DQ14C87 1099 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 KCNT2Q6UVM3 1135 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 FAM186BQ8IYM0 893 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 TGS1Q96RS0 853 aaKnown RBP33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 FUCA2Q9BTY2 467 aa33.17■■■□□ 2.9
CSNK1E-206ENST00000413574 F8W810 466 aa33.16■■■□□ 2.9
CSNK1E-206ENST00000413574 GALTP07902 379 aa33.16■■■□□ 2.9
CSNK1E-206ENST00000413574 DLATP10515 647 aaKnown RBP33.16■■■□□ 2.9
CSNK1E-206ENST00000413574 CTNNB1P35222 781 aa33.16■■■□□ 2.9
CSNK1E-206ENST00000413574 PSMC2P35998 433 aaKnown RBP33.16■■■□□ 2.9
CSNK1E-206ENST00000413574 OR1G1P47890 313 aa33.16■■■□□ 2.9
CSNK1E-206ENST00000413574 PSMD6Q15008 389 aa33.16■■■□□ 2.9
CSNK1E-206ENST00000413574 TRANK1O15050 2925 aa33.15■■■□□ 2.9
CSNK1E-206ENST00000413574 LAG3P18627 525 aa33.15■■■□□ 2.9
CSNK1E-206ENST00000413574 ERCC5P28715 1186 aaPredicted RBP33.15■■■□□ 2.9
CSNK1E-206ENST00000413574 ERVK-21P61565 698 aa33.15■■■□□ 2.9
CSNK1E-206ENST00000413574 EPC2Q52LR7 807 aa33.15■■■□□ 2.9
CSNK1E-206ENST00000413574 FOXR2Q6PJQ5 311 aa33.15■■■□□ 2.9
CSNK1E-206ENST00000413574 TMEM173Q86WV6 379 aaPredicted RBP33.15■■■□□ 2.9
CSNK1E-206ENST00000413574 SRRTQ9BXP5 876 aaKnown RBP33.15■■■□□ 2.9
CSNK1E-206ENST00000413574 SLC38A7Q9NVC3 462 aa33.15■■■□□ 2.9
CSNK1E-206ENST00000413574 PRG3Q9Y2Y8 225 aaPredicted RBP33.15■■■□□ 2.9
CSNK1E-206ENST00000413574 NRP1O14786 923 aa33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 IGFBP6P24592 240 aaPredicted RBP33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 BMPR1AP36894 532 aa33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 ALDH7A1P49419 539 aaKnown RBP33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 DLG4P78352 724 aa33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 TFAMQ00059 246 aaKnown RBP33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 ARNTL2Q8WYA1 636 aa33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 ZNF558Q96NG5 402 aa33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 UBQLN1Q9UMX0 589 aaKnown RBP33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 C2CD2Q9Y426 696 aa33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 PLXNA4Q9HCM2 1894 aa33.14■■■□□ 2.9
CSNK1E-206ENST00000413574 ALDH2P05091 517 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 CCDC192P0DO97 292 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 CLCNKBP51801 687 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 HSP90AA2PQ14568 343 aaPredicted RBP33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 ANO6Q4KMQ2 910 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 TMEM175Q9BSA9 504 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 TTYH1Q9H313 450 aaPredicted RBP33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 ZNF576Q9H609 170 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 DERAQ9Y315 318 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 OR5B17Q8NGF7 314 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 PARD3BQ8TEW8 1205 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 BCL7CQ8WUZ0 217 aaPredicted RBP33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 BORCS6Q96GS4 357 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 FNBP1Q96RU3 617 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 AAASQ9NRG9 546 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 FAN1Q9Y2M0 1017 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 PCDHB12Q9Y5F1 795 aa33.13■■■□□ 2.89
CSNK1E-206ENST00000413574 MYO9BQ13459 2157 aa33.12■■■□□ 2.89
CSNK1E-206ENST00000413574 MAPK13O15264 365 aa33.12■■■□□ 2.89
CSNK1E-206ENST00000413574 EPB41P11171 864 aaKnown RBP33.12■■■□□ 2.89
CSNK1E-206ENST00000413574 SURF1Q15526 300 aa33.12■■■□□ 2.89
CSNK1E-206ENST00000413574 SPATA1Q5VX52 437 aa33.12■■■□□ 2.89
CSNK1E-206ENST00000413574 SCARA3Q6AZY7 606 aa33.12■■■□□ 2.89
CSNK1E-206ENST00000413574 CEP63Q96MT8 703 aa33.12■■■□□ 2.89
CSNK1E-206ENST00000413574 MKNK1Q9BUB5 465 aa33.12■■■□□ 2.89
CSNK1E-206ENST00000413574 EPOPA6NHQ4 379 aa33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 LRRIQ3A6PVS8 624 aaPredicted RBP33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 TNNI1P19237 187 aa33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 CT47A1Q5JQC4 288 aaPredicted RBP33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 FILIP1Q7Z7B0 1213 aa33.11■■■□□ 2.89
CSNK1E-206ENST00000413574 KLHL23Q8NBE8 558 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms