RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 GCFC2P16383 781 aaKnown RBP18.45■□□□□ 0.54
CHMP3-203ENST00000409225 FCARP24071 287 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 IGFBP6P24592 240 aaPredicted RBP18.45■□□□□ 0.54
CHMP3-203ENST00000409225 CCR3P51677 355 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 SPIRE1Q08AE8 756 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 SIM2Q14190 667 aaPredicted RBP18.45■□□□□ 0.54
CHMP3-203ENST00000409225 NAB2Q15742 525 aa18.45■□□□□ 0.54
CHMP3-203ENST00000409225 RALYQ9UKM9 306 aaKnown RBP18.45■□□□□ 0.54
CHMP3-203ENST00000409225 PTPN2P17706 415 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 FGFR3P22607 806 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 SATB1Q01826 763 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 TMEM132AQ24JP5 1023 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 FAM78AQ5JUQ0 283 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 RTL10Q7L3V2 364 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.44■□□□□ 0.54
CHMP3-203ENST00000409225 FAM3CQ92520 227 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 TCEAL4Q96EI5 215 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 EIF2AK1Q9BQI3 630 aaKnown RBP18.44■□□□□ 0.54
CHMP3-203ENST00000409225 CORO1BQ9BR76 489 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 IER2Q9BTL4 223 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 TRMT61BQ9BVS5 477 aaKnown RBP18.44■□□□□ 0.54
CHMP3-203ENST00000409225 ZFP14Q9HCL3 533 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 AVENQ9NQS1 362 aaPredicted RBP18.44■□□□□ 0.54
CHMP3-203ENST00000409225 PRMT7Q9NVM4 692 aaPredicted RBP18.44■□□□□ 0.54
CHMP3-203ENST00000409225 CHD6Q8TD26 2715 aa18.44■□□□□ 0.54
CHMP3-203ENST00000409225 TTLL13PA6NNM8 815 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 CHURC1-FNTBB4DL54 471 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 NRG2O14511 850 aaPredicted RBP18.43■□□□□ 0.54
CHMP3-203ENST00000409225 USO1O60763 962 aaKnown RBP18.43■□□□□ 0.54
CHMP3-203ENST00000409225 CDC45O75419 566 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 LRG1P02750 347 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 TKTP29401 623 aaKnown RBP18.43■□□□□ 0.54
CHMP3-203ENST00000409225 FNTBP49356 437 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 EVCP57679 992 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 DMWDQ09019 674 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 SRSF5Q13243 272 aaKnown RBP18.43■□□□□ 0.54
CHMP3-203ENST00000409225 CSRP2Q16527 193 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 MAMSTRQ6ZN01 415 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 PIK3AP1Q6ZUJ8 805 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 MAEAQ7L5Y9 396 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 PDZD7Q9H5P4 517 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 GPRC5CQ9NQ84 441 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 ANKEF1Q9NU02 776 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 PIAS3Q9Y6X2 628 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 F5P12259 2224 aa18.43■□□□□ 0.54
CHMP3-203ENST00000409225 A0A087WWV3 80 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 I3L4J1 428 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 N4BP3O15049 544 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 HRO43593 1189 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 B3GAT3O94766 335 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 BAG4O95429 457 aaKnown RBP18.42■□□□□ 0.54
CHMP3-203ENST00000409225 PSMA5P28066 241 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 GDI1P31150 447 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 HSPA4P34932 840 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 CXCL12P48061 93 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 PRSS36Q5K4E3 855 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 NOSTRINQ8IVI9 506 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 SLFN12Q8IYM2 578 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 FAM177A1Q8N128 213 aaPredicted RBP18.42■□□□□ 0.54
CHMP3-203ENST00000409225 PIGOQ8TEQ8 1089 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 IRF7Q92985 503 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 DDX27Q96GQ7 796 aaKnown RBP18.42■□□□□ 0.54
CHMP3-203ENST00000409225 PRIMPOLQ96LW4 560 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 ZNF334Q9HCZ1 680 aaPredicted RBP18.42■□□□□ 0.54
CHMP3-203ENST00000409225 ANGPTL2Q9UKU9 493 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 USP20Q9Y2K6 914 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 GDAQ9Y2T3 454 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 BACE2Q9Y5Z0 518 aa18.42■□□□□ 0.54
CHMP3-203ENST00000409225 PRRG1O14668 218 aa18.41■□□□□ 0.54
CHMP3-203ENST00000409225 LYPLA2O95372 231 aa18.41■□□□□ 0.54
CHMP3-203ENST00000409225 ELF1P32519 619 aa18.41■□□□□ 0.54
CHMP3-203ENST00000409225 RARRES1P49788 294 aa18.41■□□□□ 0.54
CHMP3-203ENST00000409225 STK3Q13188 491 aa18.41■□□□□ 0.54
CHMP3-203ENST00000409225 TOB2Q14106 344 aaPredicted RBP18.41■□□□□ 0.54
CHMP3-203ENST00000409225 GLRA4Q5JXX5 417 aa18.41■□□□□ 0.54
CHMP3-203ENST00000409225 ANKS3Q6ZW76 656 aa18.41■□□□□ 0.54
CHMP3-203ENST00000409225 MAP4K3Q8IVH8 894 aa18.41■□□□□ 0.54
CHMP3-203ENST00000409225 ZBTB8OSQ8IWT0 167 aa18.41■□□□□ 0.54
CHMP3-203ENST00000409225 OXER1Q8TDS5 423 aa18.41■□□□□ 0.54
CHMP3-203ENST00000409225 NAP1L4Q99733 375 aaKnown RBP18.41■□□□□ 0.54
CHMP3-203ENST00000409225 LARP6Q9BRS8 491 aaKnown RBP18.41■□□□□ 0.54
CHMP3-203ENST00000409225 COL4A2P08572 1712 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 ARHGEF37A1IGU5 675 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 WDR27A2RRH5 827 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 TMEM189-UBE2V1I3L0A0 370 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 PSMC3P17980 439 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 LIG1P18858 919 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 CCR2P41597 374 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 BRCC3P46736 316 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 CLCNKBP51801 687 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 ARPP19P56211 112 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 ROR1Q01973 937 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 PRPF4BQ13523 1007 aaKnown RBP18.4■□□□□ 0.54
CHMP3-203ENST00000409225 GAS6Q14393 721 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 CDCA2Q69YH5 1023 aaPredicted RBP18.4■□□□□ 0.54
CHMP3-203ENST00000409225 HEATR6Q6AI08 1181 aaKnown RBP18.4■□□□□ 0.54
CHMP3-203ENST00000409225 IL31Q6EBC2 164 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 VITQ6UXI7 678 aa18.4■□□□□ 0.54
CHMP3-203ENST00000409225 PDZD4Q76G19 769 aaPredicted RBP18.4■□□□□ 0.54
CHMP3-203ENST00000409225 ASB16Q96NS5 453 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms