RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CALCAP01258 141 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 MYBL1P10243 752 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 RARAP10276 462 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 ICAM3P32942 547 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 NAMPTP43490 491 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 ODF2Q5BJF6 829 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 B4GALNT4Q76KP1 1039 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 HOOK3Q86VS8 718 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 MCOLN2Q8IZK6 566 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 C12orf50Q8NA57 414 aaPredicted RBP18.02■□□□□ 0.47
NUP50-203ENST00000407019 DEPTORQ8TB45 409 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 ASAP3Q8TDY4 903 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 PORCNQ9H237 461 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 PABPC3Q9H361 631 aaKnown RBP18.02■□□□□ 0.47
NUP50-203ENST00000407019 MTRF1LQ9UGC7 380 aaKnown RBP18.02■□□□□ 0.47
NUP50-203ENST00000407019 SLC12A6Q9UHW9 1150 aa18.02■□□□□ 0.47
NUP50-203ENST00000407019 ZNF541Q9H0D2 1346 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 ATG7O95352 703 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 PIGRP01833 764 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 C4BPAP04003 597 aaKnown RBP18.01■□□□□ 0.47
NUP50-203ENST00000407019 NUDT17P0C025 328 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 ATP4AP20648 1035 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 MAGEA9P43362 315 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 PPP2R2AP63151 447 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 NOL9Q5SY16 702 aaKnown RBP18.01■□□□□ 0.47
NUP50-203ENST00000407019 TDRD10Q5VZ19 366 aaKnown RBP18.01■□□□□ 0.47
NUP50-203ENST00000407019 SLFN12LQ6IEE8 588 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 DNERQ8NFT8 737 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 EPB41L4BQ9H329 900 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 DHX33Q9H6R0 707 aaKnown RBP18.01■□□□□ 0.47
NUP50-203ENST00000407019 FAM169AQ9Y6X4 670 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 LOC285556D6RIA3 1793 aa18.01■□□□□ 0.47
NUP50-203ENST00000407019 PASKQ96RG2 1323 aa18■□□□□ 0.47
NUP50-203ENST00000407019 LRRIQ4A6NIV6 560 aa18■□□□□ 0.47
NUP50-203ENST00000407019 GLRA2P23416 452 aa18■□□□□ 0.47
NUP50-203ENST00000407019 ACOT2P49753 483 aa18■□□□□ 0.47
NUP50-203ENST00000407019 WNT7BP56706 349 aa18■□□□□ 0.47
NUP50-203ENST00000407019 DENND2CQ68D51 928 aa18■□□□□ 0.47
NUP50-203ENST00000407019 NLRP14Q86W24 1093 aa18■□□□□ 0.47
NUP50-203ENST00000407019 CHST13Q8NET6 341 aa18■□□□□ 0.47
NUP50-203ENST00000407019 ZNF526Q8TF50 670 aaPredicted RBP18■□□□□ 0.47
NUP50-203ENST00000407019 AFG3L2Q9Y4W6 797 aa18■□□□□ 0.47
NUP50-203ENST00000407019 ARL2P36404 184 aa18■□□□□ 0.47
NUP50-203ENST00000407019 MAGOHP61326 146 aaKnown RBP18■□□□□ 0.47
NUP50-203ENST00000407019 TRPM4Q8TD43 1214 aa18■□□□□ 0.47
NUP50-203ENST00000407019 ZNF473Q8WTR7 871 aaKnown RBP18■□□□□ 0.47
NUP50-203ENST00000407019 SLC7A3Q8WY07 619 aa18■□□□□ 0.47
NUP50-203ENST00000407019 RBAKQ9NYW8 714 aaPredicted RBP18■□□□□ 0.47
NUP50-203ENST00000407019 LCTP09848 1927 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 MROH7Q68CQ1 1323 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 K7ERI5 159 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 FSCN2O14926 492 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 CLDN3O15551 220 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 ECEL1O95672 775 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 LDHAP00338 332 aaKnown RBP17.99■□□□□ 0.47
NUP50-203ENST00000407019 NSFP46459 744 aaKnown RBP17.99■□□□□ 0.47
NUP50-203ENST00000407019 SPOPLQ6IQ16 392 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 CRELD2Q6UXH1 353 aaPredicted RBP17.99■□□□□ 0.47
NUP50-203ENST00000407019 SPATS2Q86XZ4 545 aaKnown RBP17.99■□□□□ 0.47
NUP50-203ENST00000407019 MYCBPAPQ8TBZ2 947 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 CPA5Q8WXQ8 436 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 HAPLN2Q9GZV7 340 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 LRRC19Q9H756 370 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 GGA3Q9NZ52 723 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 PTPN22Q9Y2R2 807 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 SSC5DA1L4H1 1573 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 PTPRJQ12913 1337 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 E7EVH7 732 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 VNN1O95497 513 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 CYP1A1P04798 512 aaPredicted RBP17.99■□□□□ 0.47
NUP50-203ENST00000407019 RRM1P23921 792 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 SLC1A1P43005 524 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 SEC24CP53992 1094 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 CENPCQ03188 943 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 SEPT14Q6ZU15 432 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 ANKRD35Q8N283 1001 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 TLCD1Q96CP7 247 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 CCT8L2Q96SF2 557 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 MSTO1Q9BUK6 570 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 NIFKQ9BYG3 293 aaKnown RBP17.99■□□□□ 0.47
NUP50-203ENST00000407019 FAM129AQ9BZQ8 928 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 LRRC4CQ9HCJ2 640 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 PPP2R3BQ9Y5P8 575 aa17.99■□□□□ 0.47
NUP50-203ENST00000407019 SHBGP04278 402 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 RFC5P40937 340 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 KCNJ1P48048 391 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 CNTN2Q02246 1040 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 CUL2Q13617 745 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 SH3D19Q5HYK7 790 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 MAIP1Q8WWC4 291 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 RNF25Q96BH1 459 aaPredicted RBP17.98■□□□□ 0.47
NUP50-203ENST00000407019 ZBTB45Q96K62 511 aaPredicted RBP17.98■□□□□ 0.47
NUP50-203ENST00000407019 CGRRF1Q99675 332 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 PAGR1Q9BTK6 254 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 TARS2Q9BW92 718 aaKnown RBP17.98■□□□□ 0.47
NUP50-203ENST00000407019 ANKFY1Q9P2R3 1169 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 SIP14410 1827 aa17.98■□□□□ 0.47
NUP50-203ENST00000407019 ATXN2Q99700 1313 aaKnown RBP17.97■□□□□ 0.47
NUP50-203ENST00000407019 IGKV6D-21A0A0A0MT36 114 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 DCDC2CA8MYV0 355 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms