RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 USP28Q96RU2 1077 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 RPS6KC1Q96S38 1066 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ACO2Q99798 780 aaKnown RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 REEP2Q9BRK0 252 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 PAAF1Q9BRP4 392 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ADPGKQ9BRR6 497 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 NT5C3AQ9H0P0 336 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 CDT1Q9H211 546 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 UBN1Q9NPG3 1134 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 KMT5AQ9NQR1 393 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 ARHGAP28Q9P2N2 729 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 FBXO2Q9UK22 296 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 HCFC2Q9Y5Z7 792 aa6.34□□□□□ -1.39
HMGB1P20-201ENST00000402555 MUC6Q6W4X9 2439 aa6.34□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZDBF2Q9HCK1 2354 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 FAM86C2PA6NEL3 165 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 ABLIM1O14639 778 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 KRT18P05783 430 aaKnown RBP6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 CNPP09543 421 aaKnown RBP6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 WEE2P0C1S8 567 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 PLS3P13797 630 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 SP100P23497 879 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 GRIK3Q13003 919 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 COASYQ13057 564 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 DCAF4L1Q3SXM0 396 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZNF568Q3ZCX4 644 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 SEZ6Q53EL9 994 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 RARS2Q5T160 578 aaKnown RBP6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 ADHFE1Q8IWW8 467 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 CYP4X1Q8N118 509 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 TMEM130Q8N3G9 435 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 TMEM87AQ8NBN3 555 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 TMEM161BQ8NDZ6 487 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 RSPH1Q8WYR4 309 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 RAD54LQ92698 747 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 AK8Q96MA6 479 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 KLHL5Q96PQ7 755 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 CDCA3Q99618 268 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 HERC2P3Q9BVR0 1158 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 REPIN1Q9BWE0 567 aaKnown RBP6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 MRPL4Q9BYD3 311 aaKnown RBP6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 GPR62Q9BZJ7 368 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 S1PR5Q9H228 398 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 ZHX3Q9H4I2 956 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 GOLGA2P5Q9HBQ8 144 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 TFIP11Q9UBB9 837 aaKnown RBP6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 FAM50BQ9Y247 325 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 TNFSF13BQ9Y275 285 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 MYH15Q9Y2K3 1946 aa6.33□□□□□ -1.4
HMGB1P20-201ENST00000402555 CITO14578 2027 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 A0A087X0B3 334 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 CARNS1A5YM72 827 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 K7ENM7 598 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 MEFVO15553 781 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 LILRB3O75022 631 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 FAM13AO94988 1023 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 KIF4AO95239 1232 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 EFEMP2O95967 443 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 SOD2P04179 222 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 URODP06132 367 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 THP07101 528 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 HSP90AA1P07900 732 aaKnown RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 SPATA31D3P0C874 917 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 MAPTP10636 758 aaKnown RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 RPL17P18621 184 aaKnown RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 KLRC2P26717 231 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 GRM5P41594 1212 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 GLUD2P49448 558 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 SMCPP49901 116 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 GUCA2AQ02747 115 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 STRN3Q13033 797 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 TUSC3Q13454 348 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 PKP1Q13835 747 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 GIT2Q14161 759 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 HSP90AA2PQ14568 343 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 BMS1Q14692 1282 aaKnown RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 SLC39A14Q15043 492 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 NAB2Q15742 525 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 FUT10Q6P4F1 479 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 PRSS55Q6UWB4 352 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 TMEM184AQ6ZMB5 413 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 SPATA31D4Q6ZUB0 917 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 DYMQ7RTS9 669 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 HAUS6Q7Z4H7 955 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 GLYCTKQ8IVS8 523 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 RNF168Q8IYW5 571 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 KCTD17Q8N5Z5 321 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 MYCT1Q8N699 235 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 SLC22A17Q8WUG5 538 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 SPIRE2Q8WWL2 714 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 RIN2Q8WYP3 895 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 SUSD6Q92537 303 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 LARP4BQ92615 738 aaKnown RBP6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 CASP10Q92851 521 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 BICD1Q96G01 975 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 RPGRIP1Q96KN7 1286 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 TCHPQ9BT92 498 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 TIPINQ9BVW5 301 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 COLEC11Q9BWP8 271 aa6.32□□□□□ -1.4
HMGB1P20-201ENST00000402555 PANK2Q9BZ23 570 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms