RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 CPSF3Q9UKF6 684 aaKnown RBP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 MYH11P35749 1972 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.67□□□□□ -0.86
BRCC3-206ENST00000399042 GOLGA6L3A6NEY3 463 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 ARL5CA6NH57 179 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 ABLIM1O14639 778 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 MAPK13O15264 365 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 THP07101 528 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 KRT19P08727 400 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 ATP2A2P16615 1042 aaKnown RBP9.67□□□□□ -0.86
BRCC3-206ENST00000399042 EEF1GP26641 437 aaKnown RBP9.67□□□□□ -0.86
BRCC3-206ENST00000399042 SCNN1GP51170 649 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 EPHB4P54760 987 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 FAM189BP81408 668 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 BFSP1Q12934 665 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 TRPC3Q13507 836 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 PSMD6Q15008 389 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 DUOXA2Q1HG44 320 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 TCTN1Q2MV58 587 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 TCP11X2Q5H9J9 407 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 NOMO2Q5JPE7 1267 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 GLRA4Q5JXX5 417 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 FKBP15Q5T1M5 1219 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 LMBRD2Q68DH5 695 aaPredicted RBP9.67□□□□□ -0.86
BRCC3-206ENST00000399042 GPR153Q6NV75 609 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 LRRC55Q6ZSA7 311 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 C16orf59Q7L2K0 433 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 MRPL10Q7Z7H8 261 aaKnown RBP9.67□□□□□ -0.86
BRCC3-206ENST00000399042 BRSK2Q8IWQ3 736 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 BEST2Q8NFU1 509 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 LINC01599Q8WXQ3 324 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 HERVK_113Q902F9 699 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 ZFP42Q96MM3 310 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 POP1Q99575 1024 aaKnown RBP9.67□□□□□ -0.86
BRCC3-206ENST00000399042 MRPL9Q9BYD2 267 aaKnown RBP9.67□□□□□ -0.86
BRCC3-206ENST00000399042 ASB7Q9H672 318 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 RNF19AQ9NV58 838 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 SLC38A7Q9NVC3 462 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 TAB2Q9NYJ8 693 aa9.67□□□□□ -0.86
BRCC3-206ENST00000399042 TLL1O43897 1013 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 N4BP1O75113 896 aaKnown RBP9.66□□□□□ -0.86
BRCC3-206ENST00000399042 ADRB2P07550 413 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 TRIM49P0CI25 452 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 TRIM49CP0CI26 452 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
BRCC3-206ENST00000399042 GCLMP48507 274 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 AP3M2P53677 418 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 DEFB103AP81534 67 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 POU5F1Q01860 360 aaKnown RBP9.66□□□□□ -0.86
BRCC3-206ENST00000399042 BTG3Q14201 252 aaPredicted RBP9.66□□□□□ -0.86
BRCC3-206ENST00000399042 IQCB1Q15051 598 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 SLC10A6Q3KNW5 377 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 JADE1Q6IE81 842 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 CRELD2Q6UXH1 353 aaPredicted RBP9.66□□□□□ -0.86
BRCC3-206ENST00000399042 AGMOQ6ZNB7 445 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 WDR49Q8IV35 697 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 PTCD2Q8WV60 388 aaKnown RBP9.66□□□□□ -0.86
BRCC3-206ENST00000399042 ANP32BQ92688 251 aaKnown RBP9.66□□□□□ -0.86
BRCC3-206ENST00000399042 TOP1MTQ969P6 601 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 SNX27Q96L92 541 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 MFSD14AQ96MC6 490 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 FBXL18Q96ME1 805 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 SLC9A7Q96T83 725 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 CGRRF1Q99675 332 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 TUBGCP2Q9BSJ2 902 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 IMPG2Q9BZV3 1241 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 TMEM117Q9H0C3 514 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 RBSNQ9H1K0 784 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 VPS16Q9H269 839 aa9.66□□□□□ -0.86
BRCC3-206ENST00000399042 UBQLN1Q9UMX0 589 aaKnown RBP9.66□□□□□ -0.86
BRCC3-206ENST00000399042 SMIM28A0A1B0GU29 152 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 MEIS3P2A8K0S8 358 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 CBFA2T2O43439 604 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 OFD1O75665 1012 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 AFPP02771 609 aaKnown RBP9.65□□□□□ -0.86
BRCC3-206ENST00000399042 NFICP08651 508 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 ATP1A3P13637 1013 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 ATF7P17544 494 aaPredicted RBP9.65□□□□□ -0.86
BRCC3-206ENST00000399042 PIK3CAP42336 1068 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 OR1G1P47890 313 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 RGS19P49795 217 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 GATMP50440 423 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 MXI1P50539 228 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 UBXN1Q04323 297 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 GRIK3Q13003 919 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 CAMK2BQ13554 666 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 KRT31Q15323 416 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 SHHQ15465 462 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 MAN2A1Q16706 1144 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 VWA3BQ502W6 1294 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 WDR44Q5JSH3 913 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 TMCO2Q7Z6W1 182 aaPredicted RBP9.65□□□□□ -0.86
BRCC3-206ENST00000399042 ZNF598Q86UK7 904 aaKnown RBP9.65□□□□□ -0.86
BRCC3-206ENST00000399042 NT5DC4Q86YG4 428 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 LRRC43Q8N309 656 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 PHOSPHO2Q8TCD6 241 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 PARD3BQ8TEW8 1205 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 TMEM174Q8WUU8 243 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 MED15Q96RN5 788 aa9.65□□□□□ -0.86
BRCC3-206ENST00000399042 TSPAN18Q96SJ8 248 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms