RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 PPP1R11O60927 126 aaPredicted RBP13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 MYBL1P10243 752 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 YY1P25490 414 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 ORC1Q13415 861 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 GPAT2Q6NUI2 795 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 UBA3Q8TBC4 463 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 TAS1R2Q8TE23 839 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 TINF2Q9BSI4 451 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 EPC1Q9H2F5 836 aa13.92□□□□□ -0.18
PTPRN2-202ENST00000389416 PIK3CDO00329 1044 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 PSMD10O75832 226 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 EGFRP00533 1210 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 SRGAP2BP0DMP2 458 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 AKR1A1P14550 325 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 GARTP22102 1010 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 PON1P27169 355 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 BCAR1P56945 870 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 LRRC31Q6UY01 552 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 BZW1Q7L1Q6 419 aaKnown RBP13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 IL17RAQ96F46 866 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 GOLPH3Q9H4A6 298 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 TRIM17Q9Y577 477 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 NCAPHQ15003 741 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 CABS1Q96KC9 395 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 KLHL8Q9P2G9 620 aaPredicted RBP13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 NKRFO15226 690 aaKnown RBP eCLIP13.91□□□□□ -0.181e-6■■■□□ 17
PTPRN2-202ENST00000389416 USP2O75604 605 aaPredicted RBP13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 STAG3L1P0CL83 205 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 BRD2P25440 801 aaKnown RBP13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 SEPT6Q14141 434 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 ABCB6Q9NP58 842 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 XPNPEP3Q9NQH7 507 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 F5H423 210 aaPredicted RBP13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 ACSL3O95573 720 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 IFNAR2P48551 515 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 EPHB1P54762 984 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 BIRC2Q13490 618 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 DEFB115Q30KQ5 88 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 MAP7D1Q3KQU3 841 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 SMC1BQ8NDV3 1235 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 DPP3Q9NY33 737 aa13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 UBQLN1Q9UMX0 589 aaKnown RBP13.91□□□□□ -0.18
PTPRN2-202ENST00000389416 SNHG28P0DPA3 235 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 INHBEP58166 350 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 KCNA1Q09470 495 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 NAB2Q15742 525 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 E2F4Q16254 413 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 SV2AQ7L0J3 742 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 C1orf54Q8WWF1 131 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 SOCS4Q8WXH5 440 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 SCYL1Q96KG9 808 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 SENP7Q9BQF6 1050 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 AFG3L2Q9Y4W6 797 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 AFDNP55196 1824 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 PDE4DIPQ5VU43 2346 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 KLRG2A4D1S0 409 aaPredicted RBP13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 SPDYE5A6NIY4 337 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 SARSP49591 514 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 VEPH1Q14D04 833 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 C2CD6Q53TS8 623 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 GLIS3Q8NEA6 775 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 CCHCR1Q8TD31 782 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 FAF2Q96CS3 445 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 SMYD2Q9NRG4 433 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 DIS3Q9Y2L1 958 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 A0A087X0T9 212 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 FAM228BP0C875 321 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 TAF6P49848 677 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 CLCN6P51797 869 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 GNGT1P63211 74 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 EFHC2Q5JST6 749 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 VSIG1Q86XK7 387 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 TRIM59Q8IWR1 403 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 TTC13Q8NBP0 860 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 RNPC3Q96LT9 517 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 MCEEQ96PE7 176 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 SPON2Q9BUD6 331 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 WNT8AQ9H1J5 351 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 PIDD1Q9HB75 910 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 UBIAD1Q9Y5Z9 338 aa13.9□□□□□ -0.18
PTPRN2-202ENST00000389416 GOLGA8MH3BSY2 632 aa13.9□□□□□ -0.19
PTPRN2-202ENST00000389416 GPR182O15218 404 aa13.9□□□□□ -0.19
PTPRN2-202ENST00000389416 CXCL8P10145 99 aa13.9□□□□□ -0.19
PTPRN2-202ENST00000389416 GNL1P36915 607 aaPredicted RBP13.9□□□□□ -0.19
PTPRN2-202ENST00000389416 DCAF4L1Q3SXM0 396 aa13.9□□□□□ -0.19
PTPRN2-202ENST00000389416 SV2CQ496J9 727 aa13.9□□□□□ -0.19
PTPRN2-202ENST00000389416 TTC19Q6DKK2 380 aaPredicted RBP13.9□□□□□ -0.19
PTPRN2-202ENST00000389416 ZC3H18Q86VM9 953 aaKnown RBP13.9□□□□□ -0.19
PTPRN2-202ENST00000389416 SKA2Q8WVK7 121 aaPredicted RBP13.9□□□□□ -0.19
PTPRN2-202ENST00000389416 ZNF185O15231 689 aa13.89□□□□□ -0.19
PTPRN2-202ENST00000389416 CUL2Q13617 745 aa13.89□□□□□ -0.19
PTPRN2-202ENST00000389416 CDKAL1Q5VV42 579 aa13.89□□□□□ -0.19
PTPRN2-202ENST00000389416 CC2D1AQ6P1N0 951 aaPredicted RBP13.89□□□□□ -0.19
PTPRN2-202ENST00000389416 ELMSAN1Q6PJG2 1045 aa13.89□□□□□ -0.19
PTPRN2-202ENST00000389416 PYROXD1Q8WU10 500 aa13.89□□□□□ -0.19
PTPRN2-202ENST00000389416 ELMO3Q96BJ8 720 aa13.89□□□□□ -0.19
PTPRN2-202ENST00000389416 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.194e-6■□□□□ 11.2
PTPRN2-202ENST00000389416 TMEM117Q9H0C3 514 aa13.89□□□□□ -0.19
PTPRN2-202ENST00000389416 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms