RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SCARA5Q6ZMJ2 495 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 TRPM8Q7Z2W7 1104 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 RIBC1Q8N443 379 aaPredicted RBP8.89□□□□□ -0.99
VPS36-201ENST00000378060 NSUN6Q8TEA1 469 aaKnown RBP8.89□□□□□ -0.99
VPS36-201ENST00000378060 TRIM15Q9C019 465 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 TRABDQ9H4I3 376 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 FBXO40Q9UH90 709 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 SLC12A6Q9UHW9 1150 aa8.89□□□□□ -0.99
VPS36-201ENST00000378060 SMAPO00193 183 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 KRT10P13645 584 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 AKR1B1P15121 316 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 CCND1P24385 295 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 GRIN1Q05586 938 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 HIF1AQ16665 826 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 PPP6R3Q5H9R7 873 aaPredicted RBP8.88□□□□□ -0.99
VPS36-201ENST00000378060 JAMLQ86YT9 394 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 SULF1Q8IWU6 871 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 GPD1LQ8N335 351 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 PRPF38AQ8NAV1 312 aaKnown RBP8.88□□□□□ -0.99
VPS36-201ENST00000378060 PIP4K2CQ8TBX8 421 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 ADAMTSL1Q8N6G6 1762 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 CHEK2O96017 543 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 SRGAP2CP0DJJ0 459 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 BCAR1P56945 870 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 SNAP25P60880 206 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 ERVK-24P63145 666 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 METTL23Q86XA0 190 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 THNSL1Q8IYQ7 743 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 RCOR2Q8IZ40 523 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 CCDC124Q96CT7 223 aaKnown RBP8.88□□□□□ -0.99
VPS36-201ENST00000378060 TTC1Q99614 292 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 ZNF341Q9BYN7 854 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 C2orf40Q9H1Z8 148 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 SENP2Q9HC62 589 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 HERC5Q9UII4 1024 aaKnown RBP8.88□□□□□ -0.99
VPS36-201ENST00000378060 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.88□□□□□ -0.99
VPS36-201ENST00000378060 ARHGAP10A1A4S6 786 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 CFAP69A5D8W1 941 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 EIF3DO15371 548 aaKnown RBP eCLIP8.88□□□□□ -0.99
VPS36-201ENST00000378060 ZNF18P17022 549 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 FGFR4P22455 802 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 SDC4P31431 198 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 ELF1P32519 619 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 SNRPFP62306 86 aaKnown RBP8.88□□□□□ -0.99
VPS36-201ENST00000378060 ZNF394Q53GI3 561 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 PASD1Q8IV76 773 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 ATP6V1E2Q96A05 226 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 FAM161BQ96MY7 647 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 YIPF3Q9GZM5 350 aa8.88□□□□□ -0.99
VPS36-201ENST00000378060 FAM47DPA6NHR8 397 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 PHF20L1A8MW92 1017 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 GNGT2O14610 69 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 APOEP02649 317 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 ZFXP17010 805 aaPredicted RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 PAMP19021 973 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 RPA1P27694 616 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 NMT1P30419 496 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 ARSEP51690 589 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 COPS2P61201 443 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 PSMC1P62191 440 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 OCRLQ01968 901 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 STXBP2Q15833 593 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 RNF169Q8NCN4 708 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 SCG3Q8WXD2 468 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 PSPC1Q8WXF1 523 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 BTBD6Q96KE9 485 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 RBM15Q96T37 977 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS36-201ENST00000378060 PRMT1Q99873 361 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 TRIM51Q9BSJ1 452 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 CACYBPQ9HB71 228 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 KCND1Q9NSA2 647 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 RAB21Q9UL25 225 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 ANGPTL3Q9Y5C1 460 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 FER1L6Q2WGJ9 1857 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 CYP26A1O43174 497 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 ECM2O94769 699 aaPredicted RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 OSTNP61366 133 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 CDO1Q16878 200 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 KLHDC7AQ5VTJ3 777 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 RSPH3Q86UC2 560 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 CDKL3Q8IVW4 592 aaPredicted RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS36-201ENST00000378060 APOL6Q9BWW8 343 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 MOV10L1Q9BXT6 1211 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 YY1AP1Q9H869 796 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 POLD4Q9HCU8 107 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 BFARQ9NZS9 450 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 PDHA1P08559 390 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 SLC9A1P19634 815 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 PDCD2Q16342 344 aaPredicted RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 REEP2Q9BRK0 252 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 OSBPL1AQ9BXW6 950 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 KBTBD4Q9NVX7 518 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 NYAP2Q9P242 653 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 WDR35Q9P2L0 1181 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 G3BP2Q9UN86 482 aaKnown RBP8.87□□□□□ -0.99
VPS36-201ENST00000378060 HEY1Q9Y5J3 304 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 ALG6Q9Y672 507 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 ATP8B3O60423 1300 aa8.87□□□□□ -0.99
VPS36-201ENST00000378060 GOLGA8MH3BSY2 632 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms