RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 HPSEQ9Y251 543 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 A0A087WUV0 522 aaPredicted RBP20.82■□□□□ 0.92
PCDH8-202ENST00000377942 OGTO15294 1046 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 KLHDC7AQ5VTJ3 777 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.82■□□□□ 0.92
PCDH8-202ENST00000377942 AGPAT5Q9NUQ2 364 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 TJP2Q9UDY2 1190 aa20.82■□□□□ 0.92
PCDH8-202ENST00000377942 AP3B1O00203 1094 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 PMS2P54278 862 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 RUSC1Q9BVN2 902 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 PLEKHA5Q9HAU0 1116 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 MRFAP1Q9Y605 127 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 TXNDC9O14530 226 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 SNX17Q15036 470 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 SPATC1LQ9H0A9 340 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 TMEM253P0C7T8 217 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 GARTP22102 1010 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 TMEM62Q0P6H9 643 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 AP1B1Q10567 949 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 NAA25Q14CX7 972 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 ATP11CQ8NB49 1132 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 SLC35G2Q8TBE7 412 aa20.81■□□□□ 0.92
PCDH8-202ENST00000377942 TTC4O95801 387 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 ATP1A1P05023 1023 aaKnown RBP20.8■□□□□ 0.92
PCDH8-202ENST00000377942 TOB1P50616 345 aaPredicted RBP20.8■□□□□ 0.92
PCDH8-202ENST00000377942 MTF1Q14872 753 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 PKN1Q16512 942 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 SPON2Q9BUD6 331 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 FAM96AQ9H5X1 160 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 TARSL2A2RTX5 802 aaKnown RBP20.8■□□□□ 0.92
PCDH8-202ENST00000377942 ALDH1A1P00352 501 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 LRGUKQ96M69 825 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 PPP1R12CQ9BZL4 782 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 TTC7AQ9ULT0 858 aaPredicted RBP20.8■□□□□ 0.92
PCDH8-202ENST00000377942 KPNA6O60684 536 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 TPI1P60174 286 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 IL17RBQ9NRM6 502 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 GAKO14976 1311 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 DDNO94850 711 aaPredicted RBP20.8■□□□□ 0.92
PCDH8-202ENST00000377942 SULT1E1P49888 294 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 CC2D1AQ6P1N0 951 aaPredicted RBP20.8■□□□□ 0.92
PCDH8-202ENST00000377942 SPATA4Q8NEY3 305 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 INTUQ9ULD6 942 aa20.8■□□□□ 0.92
PCDH8-202ENST00000377942 PNMA6AP0CW24 399 aaPredicted RBP20.79■□□□□ 0.92
PCDH8-202ENST00000377942 GTF2H1P32780 548 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 NIPA1Q7RTP0 329 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 OPTNQ96CV9 577 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 TAF6P49848 677 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 MMS22LQ6ZRQ5 1243 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 VCX3AQ9NNX9 186 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 HDAC6Q9UBN7 1215 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 PACSIN2Q9UNF0 486 aaPredicted RBP20.79■□□□□ 0.92
PCDH8-202ENST00000377942 KPNA7A9QM74 516 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 STRNO43815 780 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 MX2P20592 715 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 IFT88Q13099 833 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 METTL7BQ6UX53 244 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 TC2NQ8N9U0 490 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 RASA4BC9J798 803 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 RASA4O43374 803 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 NPTXRO95502 500 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 MYBPC2Q14324 1141 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 CPA5Q8WXQ8 436 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 SDCCAG3Q96C92 435 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 HPDLQ96IR7 371 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 HAUS8Q9BT25 410 aa20.79■□□□□ 0.92
PCDH8-202ENST00000377942 AGO4Q9HCK5 861 aaKnown RBP20.79■□□□□ 0.92
PCDH8-202ENST00000377942 USP27XA6NNY8 438 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 NFIBO00712 420 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 CTIFO43310 598 aaKnown RBP20.78■□□□□ 0.92
PCDH8-202ENST00000377942 EIF3EP60228 445 aaKnown RBP20.78■□□□□ 0.92
PCDH8-202ENST00000377942 HERVK_113P62684 666 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 NUDT18Q6ZVK8 323 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 CCZ1BP86790 482 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 CCZ1P86791 482 aaPredicted RBP20.78■□□□□ 0.92
PCDH8-202ENST00000377942 RCN2Q14257 317 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 ZNF235Q14590 738 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 IZUMO3Q5VZ72 239 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 KSR1Q8IVT5 923 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 Q9H521 79 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.78■□□□□ 0.92
PCDH8-202ENST00000377942 LSM7Q9UK45 103 aaKnown RBP20.78■□□□□ 0.92
PCDH8-202ENST00000377942 DBR1Q9UK59 544 aaKnown RBP20.78■□□□□ 0.92
PCDH8-202ENST00000377942 CFAP69A5D8W1 941 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 MRPS25P82663 173 aaKnown RBP20.78■□□□□ 0.92
PCDH8-202ENST00000377942 PID1Q7Z2X4 250 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 CRLF3Q8IUI8 442 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 PCSK9Q8NBP7 692 aaKnown RBP20.78■□□□□ 0.92
PCDH8-202ENST00000377942 SLC30A5Q8TAD4 765 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 GPR182O15218 404 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 PSMD3O43242 534 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 CYBBP04839 570 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 DRP2Q13474 957 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 MAPRE1Q15691 268 aaKnown RBP20.78■□□□□ 0.92
PCDH8-202ENST00000377942 PDCD6IPQ8WUM4 868 aaKnown RBP20.78■□□□□ 0.92
PCDH8-202ENST00000377942 TXLNGQ9NUQ3 528 aa20.78■□□□□ 0.92
PCDH8-202ENST00000377942 GUCY2CP25092 1073 aa20.77■□□□□ 0.92
PCDH8-202ENST00000377942 GIT2Q14161 759 aa20.77■□□□□ 0.92
PCDH8-202ENST00000377942 TRIM67Q6ZTA4 783 aa20.77■□□□□ 0.92
PCDH8-202ENST00000377942 WDR75Q8IWA0 830 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms