RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 KXD1Q9BQD3 176 aa15.18■□□□□ 0.02
CXCL12-202ENST00000374426 GOLGA2P5Q9HBQ8 144 aa15.18■□□□□ 0.02
CXCL12-202ENST00000374426 DNMT3BQ9UBC3 853 aaKnown RBP15.18■□□□□ 0.02
CXCL12-202ENST00000374426 CDY1Q9Y6F8 540 aa15.18■□□□□ 0.02
CXCL12-202ENST00000374426 F5P12259 2224 aa15.17■□□□□ 0.02
CXCL12-202ENST00000374426 KANSL1LA0AUZ9 987 aa15.17■□□□□ 0.02
CXCL12-202ENST00000374426 MUTP22033 750 aa15.17■□□□□ 0.02
CXCL12-202ENST00000374426 TKTP29401 623 aaKnown RBP15.17■□□□□ 0.02
CXCL12-202ENST00000374426 ORC2Q13416 577 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-202ENST00000374426 MLF2Q15773 248 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-202ENST00000374426 SLC44A4Q53GD3 710 aa15.17■□□□□ 0.02
CXCL12-202ENST00000374426 ING5Q8WYH8 240 aa15.17■□□□□ 0.02
CXCL12-202ENST00000374426 DDX27Q96GQ7 796 aaKnown RBP15.17■□□□□ 0.02
CXCL12-202ENST00000374426 IFT74Q96LB3 600 aa15.17■□□□□ 0.02
CXCL12-202ENST00000374426 BHMT2Q9H2M3 363 aa15.17■□□□□ 0.02
CXCL12-202ENST00000374426 KCNH3Q9ULD8 1083 aa15.17■□□□□ 0.02
CXCL12-202ENST00000374426 MTF2Q9Y483 593 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-202ENST00000374426 BACE2Q9Y5Z0 518 aa15.17■□□□□ 0.02
CXCL12-202ENST00000374426 SPTBN2O15020 2390 aa15.17■□□□□ 0.02
CXCL12-202ENST00000374426 SMIM28A0A1B0GU29 152 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 I3L4J1 428 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 BRCC3P46736 316 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 PRKCQQ04759 706 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 SOX4Q06945 474 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-202ENST00000374426 SLC5A9Q2M3M2 681 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 HAUS3Q68CZ6 603 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 POTEHQ6S545 545 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 ANKS3Q6ZW76 656 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 RTL10Q7L3V2 364 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 KIAA2013Q8IYS2 634 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 CEP120Q8N960 986 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 KIFAP3Q92845 792 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 RMDN1Q96DB5 314 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 UROC1Q96N76 676 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 FOXP1Q9H334 677 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-202ENST00000374426 DAXXQ9UER7 740 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-202ENST00000374426 TNFSF13BQ9Y275 285 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 TRIP11Q15643 1979 aa15.16■□□□□ 0.02
CXCL12-202ENST00000374426 K7ERI5 159 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 TRAPPC3O43617 180 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 RHOP08100 348 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 CD72P21854 359 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 CCT6AP40227 531 aaKnown RBP15.15■□□□□ 0.02
CXCL12-202ENST00000374426 FXR2P51116 673 aaKnown RBP eCLIP15.15■□□□□ 0.02
CXCL12-202ENST00000374426 PFKPQ01813 784 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 UBXN2BQ14CS0 331 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 XKR4Q5GH76 650 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 TTC38Q5R3I4 469 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 SLC8B1Q6J4K2 584 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 ALKAL1Q6UXT8 129 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 C4orf32Q8N8J7 132 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 SUMF1Q8NBK3 374 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 C8orf76Q96K31 380 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 BCO2Q9BYV7 579 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 OSBPL6Q9BZF3 934 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 CDT1Q9H211 546 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 PTPRHQ9HD43 1115 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 KIAA1024Q9UPX6 916 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 MRPS23Q9Y3D9 190 aaKnown RBP15.15■□□□□ 0.02
CXCL12-202ENST00000374426 MIA3Q5JRA6 1907 aa15.15■□□□□ 0.02
CXCL12-202ENST00000374426 FAM170BA6NMN3 283 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 GRM5P41594 1212 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 ROR1Q01973 937 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 NBR1Q14596 966 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 APBB1IPQ7Z5R6 666 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-202ENST00000374426 CCDC83Q8IWF9 413 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 DAW1Q8N136 415 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 DCLK2Q8N568 766 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 ZNF461Q8TAF7 563 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 RUBCNQ92622 972 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 MCRS1Q96EZ8 462 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 ZMAT2Q96NC0 199 aaKnown RBP15.14■□□□□ 0.01
CXCL12-202ENST00000374426 ACO2Q99798 780 aaKnown RBP15.14■□□□□ 0.01
CXCL12-202ENST00000374426 PLA2G2FQ9BZM2 168 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 LTB4R2Q9NPC1 389 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 AVENQ9NQS1 362 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-202ENST00000374426 DDX19AQ9NUU7 478 aaKnown RBP15.14■□□□□ 0.01
CXCL12-202ENST00000374426 SPATA6Q9NWH7 488 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-202ENST00000374426 GDE1Q9NZC3 331 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 LRWD1Q9UFC0 647 aa15.14■□□□□ 0.01
CXCL12-202ENST00000374426 EPG5Q9HCE0 2579 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 ARHGEF37A1IGU5 675 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 WDR27A2RRH5 827 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 PODXLO00592 558 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 LAMTOR5O43504 91 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 TBC1D4O60343 1298 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 ECI2O75521 394 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 ABLIM3O94929 683 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 CEBPBP17676 345 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 NPTX2P47972 431 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 YARSP54577 528 aaKnown RBP15.13■□□□□ 0.01
CXCL12-202ENST00000374426 PEX3P56589 373 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 OSTNP61366 133 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 ZNF528Q3MIS6 628 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 ZNF568Q3ZCX4 644 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 VARS2Q5ST30 1063 aaKnown RBP15.13■□□□□ 0.01
CXCL12-202ENST00000374426 TAS1R3Q7RTX0 852 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 FBXO18Q8NFZ0 1043 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 HINFPQ9BQA5 517 aa15.13■□□□□ 0.01
CXCL12-202ENST00000374426 CCDC94Q9BW85 323 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms