RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 HAO1Q9UJM8 370 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 PHTF1Q9UMS5 762 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 F5H6K3 240 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 SERPINB3P29508 390 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 CDH6P55285 790 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 KLRC3Q07444 240 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 BBS5Q8N3I7 341 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 CEP19Q96LK0 163 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 MAGEA13PA6NCF6 341 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 GHRP10912 638 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 AP1B1Q10567 949 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 PTK7Q13308 1070 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 ARL13BQ3SXY8 428 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 OLFML2BQ68BL8 750 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 C4orf50Q6ZRC1 276 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 OR6B3Q8NGW1 331 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 HDAC7Q8WUI4 952 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 CNKSR1Q969H4 720 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 POLR3CQ9BUI4 534 aaPredicted RBP16.8■□□□□ 0.28
COL17A1-202ENST00000369733 THAP2Q9H0W7 228 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 PDP2Q9P2J9 529 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 KIAA1210Q9ULL0 1709 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 PTPRUQ92729 1446 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 CRKP46108 304 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 PCYT1AP49585 367 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 SARSP49591 514 aaKnown RBP16.8■□□□□ 0.28
COL17A1-202ENST00000369733 ZNF200P98182 395 aaPredicted RBP16.8■□□□□ 0.28
COL17A1-202ENST00000369733 RCN1Q15293 331 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 MAGEB18Q96M61 343 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 RMDN3Q96TC7 470 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 SENP7Q9BQF6 1050 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 OSBPL8Q9BZF1 889 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 XPO7Q9UIA9 1087 aaKnown RBP16.8■□□□□ 0.28
COL17A1-202ENST00000369733 SYCE1LA8MT33 242 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 FNTAP49354 379 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 GPC3P51654 580 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 LMBRD2Q68DH5 695 aaPredicted RBP16.8■□□□□ 0.28
COL17A1-202ENST00000369733 RSPH3Q86UC2 560 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 SLC13A5Q86YT5 568 aaPredicted RBP16.8■□□□□ 0.28
COL17A1-202ENST00000369733 CACYBPQ9HB71 228 aaKnown RBP16.8■□□□□ 0.28
COL17A1-202ENST00000369733 USP21Q9UK80 565 aa16.8■□□□□ 0.28
COL17A1-202ENST00000369733 UBOX5O94941 541 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 CENPCQ03188 943 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 NT5DC1Q5TFE4 455 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 RBAKQ9NYW8 714 aaPredicted RBP16.79■□□□□ 0.28
COL17A1-202ENST00000369733 CHORDC1Q9UHD1 332 aaPredicted RBP16.79■□□□□ 0.28
COL17A1-202ENST00000369733 O00370 1275 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 CPA2P48052 419 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 PSMC5P62195 406 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 ZC2HC1CQ53FD0 456 aaPredicted RBP16.79■□□□□ 0.28
COL17A1-202ENST00000369733 HABP4Q5JVS0 413 aaKnown RBP16.79■□□□□ 0.28
COL17A1-202ENST00000369733 LRRC8EQ6NSJ5 796 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 ZSWIM1Q9BR11 485 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 ZFATQ9P243 1243 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 SFNP31947 248 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 NAIF1Q69YI7 327 aaPredicted RBP16.79■□□□□ 0.28
COL17A1-202ENST00000369733 RPS6KC1Q96S38 1066 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 SEMA6BQ9H3T3 888 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 TROAPQ12815 778 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 FAM102AQ5T9C2 384 aaPredicted RBP16.79■□□□□ 0.28
COL17A1-202ENST00000369733 C3orf62Q6ZUJ4 267 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 PRPF31Q8WWY3 499 aaKnown RBP16.79■□□□□ 0.28
COL17A1-202ENST00000369733 ZNF341Q9BYN7 854 aa16.79■□□□□ 0.28
COL17A1-202ENST00000369733 KCNMA1Q12791 1236 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 EEPD1Q7L9B9 569 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 NLGN1Q8N2Q7 840 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 SCG3Q8WXD2 468 aaKnown RBP16.78■□□□□ 0.28
COL17A1-202ENST00000369733 KCNK16Q96T55 309 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 ZHX2Q9Y6X8 837 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 COL15A1P39059 1388 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 CAMSAP1Q5T5Y3 1602 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 E2F6O75461 281 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 PMLP29590 882 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 ZNF543Q08ER8 600 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 TMTC4Q5T4D3 741 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 ARMCX2Q7L311 632 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 PRPF39Q86UA1 669 aaKnown RBP16.78■□□□□ 0.28
COL17A1-202ENST00000369733 MTRQ99707 1265 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 POLR3FQ9H1D9 316 aaPredicted RBP16.78■□□□□ 0.28
COL17A1-202ENST00000369733 KBTBD4Q9NVX7 518 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 MTMR4Q9NYA4 1195 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 PIK3R2O00459 728 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 GRB10Q13322 594 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 KCTD2Q14681 263 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 CHMP2BQ9UQN3 213 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 LMTK2Q8IWU2 1503 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 PON1P27169 355 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 THAP11Q96EK4 314 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 GABBR1Q9UBS5 961 aa16.78■□□□□ 0.28
COL17A1-202ENST00000369733 ZC3H7BQ9UGR2 993 aaKnown RBP16.78■□□□□ 0.28
COL17A1-202ENST00000369733 PPRC1Q5VV67 1664 aaKnown RBP16.77■□□□□ 0.28
COL17A1-202ENST00000369733 ZSCAN5CA6NGD5 496 aaPredicted RBP16.77■□□□□ 0.28
COL17A1-202ENST00000369733 KLHL2O95198 593 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 POU5F1BQ06416 359 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 MAPK6Q16659 721 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 TEX2Q8IWB9 1127 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 DAGLBQ8NCG7 672 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 NCLNQ969V3 563 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 304.6 ms