RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SLC9A1P19634 815 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 ZACNQ401N2 412 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 TDRD10Q5VZ19 366 aaKnown RBP11.84□□□□□ -0.51
BRCC3-204ENST00000369462 ALKAL1Q6UXT8 129 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 AGMOQ6ZNB7 445 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.84□□□□□ -0.51
BRCC3-204ENST00000369462 CD302Q8IX05 232 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 TMEM199Q8N511 208 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 TAS1R2Q8TE23 839 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 VWCEQ96DN2 955 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 KIF12Q96FN5 646 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 FAM207AQ9NSI2 230 aaPredicted RBP11.84□□□□□ -0.51
BRCC3-204ENST00000369462 SIK3Q9Y2K2 1263 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 CITO14578 2027 aa11.84□□□□□ -0.51
BRCC3-204ENST00000369462 LAMA2P24043 3122 aaKnown RBP11.83□□□□□ -0.51
BRCC3-204ENST00000369462 GTPBP10A4D1E9 387 aaKnown RBP11.83□□□□□ -0.52
BRCC3-204ENST00000369462 LRRN2O75325 713 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 CDC25BP30305 580 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 RFC2P35250 354 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 APBA1Q02410 837 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 TMEM132DQ14C87 1099 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 PGBD4Q96DM1 585 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 PDLIM2Q96JY6 352 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 GAD1Q99259 594 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 HTATIP2Q9BUP3 242 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.83□□□□□ -0.522e-6■■■■■ 96.1
BRCC3-204ENST00000369462 C1orf112Q9NSG2 853 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 SMIM28A0A1B0GU29 152 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 P4HA2O15460 535 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 EVI5O60447 810 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 PHACTR2O75167 634 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 PON1P27169 355 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 MLH1P40692 756 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 AFF1P51825 1210 aaKnown RBP11.83□□□□□ -0.52
BRCC3-204ENST00000369462 FAM189BP81408 668 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 C15orf39Q6ZRI6 1047 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 TRAPPC11Q7Z392 1133 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 ZNF598Q86UK7 904 aaKnown RBP11.83□□□□□ -0.52
BRCC3-204ENST00000369462 FBXL13Q8NEE6 735 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 ANKRD36BP1Q96IX9 119 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 CNTN3Q9P232 1028 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 C2CD2Q9Y426 696 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 TANC1Q9C0D5 1861 aa11.83□□□□□ -0.52
BRCC3-204ENST00000369462 ARL5CA6NH57 179 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 PMM2O15305 246 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 TNNC2P02585 160 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 ACTN1P12814 892 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 TRIM21P19474 475 aaKnown RBP11.82□□□□□ -0.52
BRCC3-204ENST00000369462 AP3M2P53677 418 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 IKBKEQ14164 716 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 SCARA3Q6AZY7 606 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 CNKSR3Q6P9H4 555 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 TNS4Q8IZW8 715 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 TMEM130Q8N3G9 435 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 CACTINQ8WUQ7 758 aaKnown RBP11.82□□□□□ -0.52
BRCC3-204ENST00000369462 CPLX3Q8WVH0 158 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 RSAD1Q9HA92 442 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 GIT1Q9Y2X7 761 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 COQ4Q9Y3A0 265 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 TRIP11Q15643 1979 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.82□□□□□ -0.52
BRCC3-204ENST00000369462 EOMESO95936 686 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 ACRP10323 421 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 SYN1P17600 705 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 GUCY2FP51841 1108 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 EPC2Q52LR7 807 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 XKR4Q5GH76 650 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 TRIM65Q6PJ69 517 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 DPF3Q92784 378 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 SEMA4DQ92854 862 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 C18orf25Q96B23 403 aaPredicted RBP11.82□□□□□ -0.52
BRCC3-204ENST00000369462 RPS6KC1Q96S38 1066 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 LSM14BQ9BX40 385 aaKnown RBP11.82□□□□□ -0.52
BRCC3-204ENST00000369462 RAB20Q9NX57 234 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 PLAGL2Q9UPG8 496 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 CEP290O15078 2479 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 PTGESO14684 152 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 EPHB6O15197 1021 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 VNN1O95497 513 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 CST3P01034 146 aaPredicted RBP11.82□□□□□ -0.52
BRCC3-204ENST00000369462 HLA-DRAP01903 254 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 CCDC173Q0VFZ6 552 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 NT5DC4Q86YG4 428 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 RPUSD2Q8IZ73 545 aaKnown RBP11.82□□□□□ -0.52
BRCC3-204ENST00000369462 C1orf127Q8N9H9 656 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 EHBP1Q8NDI1 1231 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 GSTCDQ8NEC7 633 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 NEK11Q8NG66 645 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 LMO3Q8TAP4 145 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 BADQ92934 168 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 ELMO3Q96BJ8 720 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 INTS2Q9H0H0 1204 aaKnown RBP11.82□□□□□ -0.52
BRCC3-204ENST00000369462 INPP5FQ9Y2H2 1132 aa11.82□□□□□ -0.52
BRCC3-204ENST00000369462 ALPK3Q96L96 1907 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 ITIH6Q6UXX5 1313 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 KRT19P08727 400 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 KCNE1P15382 129 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 PIK3CAP42336 1068 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 SCNN1GP51170 649 aa11.81□□□□□ -0.52
BRCC3-204ENST00000369462 LRMPQ12912 555 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms