RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 SPICE1Q8N0Z3 855 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 RPGRQ92834 1020 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 FBXW5Q969U6 566 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 SKA1Q96BD8 255 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 NOX5Q96PH1 765 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 IWS1Q96ST2 819 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 SYT3Q9BQG1 590 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 C22orf23Q9BZE7 217 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 CCDC8Q9H0W5 538 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 R3HDMLQ9H3Y0 253 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 SMOC1Q9H4F8 434 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 KMT5AQ9NQR1 393 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 MTMR10Q9NXD2 777 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 B4GALT6Q9UBX8 382 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 CBLCQ9ULV8 474 aa5.83□□□□□ -1.48
ECHDC1-204ENST00000368292 TCRBV5S4A2TA0A5A2 114 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 FAM47E-STBD1D6RA91 191 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 ATP2A2P16615 1042 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 ZNF132P52740 706 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 NAP1L1P55209 391 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 ZBED6P86452 979 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 TTF1Q15361 905 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 CR1LQ2VPA4 569 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 SPECC1Q5M775 1068 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 ANO1Q5XXA6 986 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 CREB3L3Q68CJ9 461 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 ETV3LQ6ZN32 361 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 LCNL1Q6ZST4 164 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 SPATS2Q86XZ4 545 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 KRTAP1-3Q8IUG1 177 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 RBM12BQ8IXT5 1001 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 DEFB123Q8N688 67 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 CHST14Q8NCH0 376 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 SMARCC2Q8TAQ2 1214 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 COG1Q8WTW3 980 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 CLEC4DQ8WXI8 215 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 ZNF496Q96IT1 587 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 PWWP2AQ96N64 755 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.82□□□□□ -1.485e-9■■■■■ 28.9
ECHDC1-204ENST00000368292 NGRNQ9NPE2 291 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 RIC8AQ9NPQ8 531 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 LUZP4Q9P127 313 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 MYOTQ9UBF9 498 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 ASH2LQ9UBL3 628 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 PGAP2Q9UHJ9 254 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 MAFFQ9ULX9 164 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 TELO2Q9Y4R8 837 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 PCDHB4Q9Y5E5 795 aa5.82□□□□□ -1.48
ECHDC1-204ENST00000368292 SOS1Q07889 1333 aaPredicted RBP5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 POLR2AP24928 1970 aaKnown RBP5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 RFXAPO00287 272 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 CHL1O00533 1208 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 SLC27A2O14975 620 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 FKBP9O95302 570 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 SCGB1D2O95969 90 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 IFIT2P09913 472 aaKnown RBP5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 NBPF7P0C2Y1 421 aaPredicted RBP5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 PSMA3P25788 255 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 IARSP41252 1262 aaKnown RBP5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 TMPRSS15P98073 1019 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 FZD5Q13467 585 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 E2F5Q15329 346 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 FAM47CQ5HY64 1035 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 FAM83BQ5T0W9 1011 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 TSHZ3Q63HK5 1081 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 FKBP9P1Q75LS8 142 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 MYO1HQ8N1T3 1032 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 CISD2Q8N5K1 135 aaKnown RBP5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 ANKRD42Q8N9B4 389 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 UHMK1Q8TAS1 419 aaKnown RBP5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 PHOSPHO1Q8TCT1 267 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 SH3RF2Q8TEC5 729 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 FNIP1Q8TF40 1166 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 CHTF18Q8WVB6 975 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 DDX11Q96FC9 970 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 MPP4Q96JB8 637 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 PUS7LQ9H0K6 701 aaKnown RBP5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 TSPY26PQ9H489 355 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 CABP5Q9NP86 173 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 THG1LQ9NWX6 298 aaKnown RBP5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 APOBEC2Q9Y235 224 aaKnown RBP5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 NCAPD2Q15021 1401 aa5.81□□□□□ -1.48
ECHDC1-204ENST00000368292 SHTN1A0MZ66 631 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 PTPDC1A2A3K4 754 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 GTPBP10A4D1E9 387 aaKnown RBP5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 KRIT1O00522 736 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 KIF1CO43896 1103 aaKnown RBP5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 LRG1P02750 347 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 LTFP02788 710 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 AMY2AP04746 511 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 GNAT1P11488 350 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 AMY2BP19961 511 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 STAT5AP42229 794 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 LSSP48449 732 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 AFF3P51826 1226 aaKnown RBP5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 IL2P60568 153 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 LACTBP83111 547 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 CAP1Q01518 475 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 NUCB1Q02818 461 aa5.8□□□□□ -1.48
ECHDC1-204ENST00000368292 DLX2Q07687 328 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms