RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 Q9H521 79 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 FMN2Q9NZ56 1722 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 CASQ2O14958 399 aaPredicted RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 PJA2O43164 708 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 GSTA1P08263 222 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 GSTA2P09210 222 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 IREB2P48200 963 aaKnown RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 CDH6P55285 790 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 EMC2Q15006 297 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 MMEL1Q495T6 779 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 MIIPQ5JXC2 388 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 CATSPER4Q7RTX7 472 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 ZNF720Q7Z2F6 126 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 CBWD2Q8IUF1 395 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 CCDC117Q8IWD4 279 aaPredicted RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 GMCL1Q96IK5 515 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 MCEEQ96PE7 176 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 MOV10L1Q9BXT6 1211 aaKnown RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 ALG13Q9NP73 1137 aaKnown RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 DDX4Q9NQI0 724 aaKnown RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 TPX2Q9ULW0 747 aaKnown RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 SRGAP2BP0DMP2 458 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 KRT3P12035 628 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 ITGA4P13612 1032 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 BCAR1P56945 870 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 SNRPFP62306 86 aaKnown RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 C4orf33Q8N1A6 199 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 CYP2W1Q8TAV3 490 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 SLC20A1Q8WUM9 679 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 ROPN1BQ9BZX4 212 aaPredicted RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 ROPN1Q9HAT0 212 aaPredicted RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 FGFR1OP2Q9NVK5 253 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 ANGPTL2Q9UKU9 493 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 TBX20Q9UMR3 447 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 NEU2Q9Y3R4 380 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 A0A0A6YYK5 440 aaPredicted RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 RCCD1A6NED2 376 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 EPHB6O15197 1021 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 FAM153BP0C7A2 387 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 KITP10721 976 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 PBX1P40424 430 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 FAM153CQ494X1 144 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 C1orf228Q6PIY5 440 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 TAAR1Q96RJ0 339 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 SENP1Q9P0U3 644 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 FAM153AQ9UHL3 310 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 ZNRF3Q9ULT6 936 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 F5H423 210 aaPredicted RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 GOLGA8RI6L899 631 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 PRKCBP05771 671 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 STAT5BP51692 787 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 MIPOL1Q8TD10 442 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 RAPGEF5Q92565 580 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 DDX23Q9BUQ8 820 aaKnown RBP12.37□□□□□ -0.43
COPA-202ENST00000368069 TRAF3IP3Q9Y228 551 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 TACC3Q9Y6A5 838 aa12.37□□□□□ -0.43
COPA-202ENST00000368069 SPECC1L-ADORA2AF8WAN1 911 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 RNF225M0QZC1 329 aaPredicted RBP12.36□□□□□ -0.43
COPA-202ENST00000368069 EFNA5P52803 228 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 EIF3EP60228 445 aaKnown RBP12.36□□□□□ -0.43
COPA-202ENST00000368069 RPS6P62753 249 aaKnown RBP12.36□□□□□ -0.43
COPA-202ENST00000368069 CDR2Q01850 454 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 DPY19L2Q6NUT2 758 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 BZW1Q7L1Q6 419 aaKnown RBP12.36□□□□□ -0.43
COPA-202ENST00000368069 TRPM8Q7Z2W7 1104 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 WDR75Q8IWA0 830 aaKnown RBP12.36□□□□□ -0.43
COPA-202ENST00000368069 EPS8L3Q8TE67 593 aaKnown RBP12.36□□□□□ -0.43
COPA-202ENST00000368069 TNFRSF25Q93038 417 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 PRMT6Q96LA8 375 aaPredicted RBP12.36□□□□□ -0.43
COPA-202ENST00000368069 CYTH2Q99418 400 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 ANKEF1Q9NU02 776 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 SCOCQ9UIL1 159 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 CAMTA1Q9Y6Y1 1673 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 MRC1P22897 1456 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 CCT8L1PA6NM43 557 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 RALAP11233 206 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 FNTAP49354 379 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 NOP14P78316 857 aaKnown RBP12.36□□□□□ -0.43
COPA-202ENST00000368069 DBN1Q16643 649 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 SPOPLQ6IQ16 392 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 ACAD10Q6JQN1 1059 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 FBXO25Q8TCJ0 367 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 OLFML3Q9NRN5 406 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 IGSF9BQ9UPX0 1349 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 LTN1O94822 1766 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 GTPBP10A4D1E9 387 aaKnown RBP12.36□□□□□ -0.43
COPA-202ENST00000368069 CFAP69A5D8W1 941 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 FAM86B1E9PN63 330 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 LMNAP02545 664 aaKnown RBP12.36□□□□□ -0.43
COPA-202ENST00000368069 FAM86B2P0C5J1 330 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 AARSP49588 968 aaKnown RBP eCLIP12.36□□□□□ -0.434e-7■□□□□ 9.5
COPA-202ENST00000368069 TKFCQ3LXA3 575 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 GMCL1P1Q8NEA9 526 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 SPC25Q9HBM1 224 aa12.36□□□□□ -0.43
COPA-202ENST00000368069 MAGEA4P43358 317 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 ERVK-9P63128 1117 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 SYCP2LQ5T4T6 812 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 FOXR1Q6PIV2 292 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms