RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CCT8L2Q96SF2 557 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 RBAKQ9NYW8 714 aaPredicted RBP16.87■□□□□ 0.29
COL18A1-203ENST00000359759 CDYLQ9Y232 598 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 AP3B2Q13367 1082 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 STAT4Q14765 748 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 DDX53Q86TM3 631 aaKnown RBP16.87■□□□□ 0.29
COL18A1-203ENST00000359759 SNX31Q8N9S9 440 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 KIF12Q96FN5 646 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 TRPC7Q9HCX4 862 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 SOAT1P35610 550 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 TRIP10Q15642 601 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 STMN3Q9NZ72 180 aa16.87■□□□□ 0.29
COL18A1-203ENST00000359759 C16orf96A6NNT2 1141 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 SASH1O94885 1247 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 ABCE1P61221 599 aaKnown RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 BTBD8Q5XKL5 378 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 HMBSP08397 361 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 HOXA7P31268 230 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 GRIK1P39086 918 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 TPI1P60174 286 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 FLAD1Q8NFF5 587 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 SLC35G2Q8TBE7 412 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 ERP27Q96DN0 273 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 KLF6Q99612 283 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 PLEKHA5Q9HAU0 1116 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 USP15Q9Y4E8 981 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 CAND2O75155 1236 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 GGPS1O95749 300 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 CLK1P49759 484 aaKnown RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 IRX2Q9BZI1 471 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 BRD8Q9H0E9 1235 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 RERGLQ9H628 205 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 CPB1P15086 417 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 IREB2P48200 963 aaKnown RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 ACTR2P61160 394 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 USP10Q14694 798 aaKnown RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 C11orf96Q7Z7L8 435 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 GPD1LQ8N335 351 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 M0R3G1 203 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 BRD2P25440 801 aaKnown RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 RGS7P49802 495 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 PRPF18Q99633 342 aaKnown RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 SRP68Q9UHB9 627 aaKnown RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 ZNF197O14709 1029 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 FUT11Q495W5 492 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 SNRNP48Q6IEG0 339 aaKnown RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 HEATR4Q86WZ0 1026 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 RFFLQ8WZ73 363 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 GFM2Q969S9 779 aaKnown RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 CD274Q9NZQ7 290 aa16.86■□□□□ 0.29
COL18A1-203ENST00000359759 FARP1Q9Y4F1 1045 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-203ENST00000359759 MYL2P10916 166 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 SCP2P22307 547 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 TMEM47Q9BQJ4 181 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 LXNQ9BS40 222 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 PPP1R37O75864 691 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 CDC27P30260 824 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 RUNX1T1Q06455 604 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 SLC25A41Q8N5S1 370 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 SLC44A5Q8NCS7 719 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 DNAJC9Q8WXX5 260 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 PLEKHA8Q96JA3 519 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 ZFP42Q96MM3 310 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 RANBP17Q9H2T7 1088 aaKnown RBP16.85■□□□□ 0.29
COL18A1-203ENST00000359759 CXorf56Q9H5V9 222 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 NBPF26B4DH59 902 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 SERPINB1P30740 379 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 ARHGAP17Q68EM7 881 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 NBPF15Q8N660 670 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 ZNF579Q8NAF0 562 aaKnown RBP16.85■□□□□ 0.29
COL18A1-203ENST00000359759 PIDD1Q9HB75 910 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 PLA2G4AP47712 749 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 DAB2IPQ5VWQ8 1189 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 DPF2Q92785 391 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 SLC10A4Q96EP9 437 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 MRPL4Q9BYD3 311 aaKnown RBP16.85■□□□□ 0.29
COL18A1-203ENST00000359759 DYRK4Q9NR20 520 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 ARHGEF38Q9NXL2 777 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 TARSL2A2RTX5 802 aaKnown RBP16.85■□□□□ 0.29
COL18A1-203ENST00000359759 ZBTB39O15060 712 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 RTN2O75298 545 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 DNAL1Q4LDG9 190 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 DTNBP1Q96EV8 351 aa16.85■□□□□ 0.29
COL18A1-203ENST00000359759 OSBPL5Q9H0X9 879 aaPredicted RBP16.85■□□□□ 0.29
COL18A1-203ENST00000359759 EIF3HO15372 352 aaKnown RBP eCLIP16.84■□□□□ 0.295e-8■□□□□ 10.3
COL18A1-203ENST00000359759 SLC16A1P53985 500 aa16.84■□□□□ 0.29
COL18A1-203ENST00000359759 NLRP11P59045 1033 aaKnown RBP16.84■□□□□ 0.29
COL18A1-203ENST00000359759 TMEM179Q6ZVK1 233 aa16.84■□□□□ 0.29
COL18A1-203ENST00000359759 HDDC2Q7Z4H3 204 aa16.84■□□□□ 0.29
COL18A1-203ENST00000359759 EIF2AK1Q9BQI3 630 aaKnown RBP16.84■□□□□ 0.29
COL18A1-203ENST00000359759 DLGAP2Q9P1A6 1054 aa16.84■□□□□ 0.29
COL18A1-203ENST00000359759 AGTP01019 485 aa16.84■□□□□ 0.29
COL18A1-203ENST00000359759 NLGN1Q8N2Q7 840 aa16.84■□□□□ 0.29
COL18A1-203ENST00000359759 C9orf72Q96LT7 481 aa16.84■□□□□ 0.29
COL18A1-203ENST00000359759 MXD3Q9BW11 206 aa16.84■□□□□ 0.29
COL18A1-203ENST00000359759 CAPN10Q9HC96 672 aa16.84■□□□□ 0.29
COL18A1-203ENST00000359759 LUZP2Q86TE4 346 aa16.84■□□□□ 0.29
COL18A1-203ENST00000359759 HES6Q96HZ4 224 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms