RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 PTDSS1P48651 473 aaKnown RBP18.26■□□□□ 0.51
PRKCD-201ENST00000330452 RCN2Q14257 317 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 KIAA1755Q5JYT7 1200 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 ZNF362Q5T0B9 420 aaPredicted RBP18.26■□□□□ 0.51
PRKCD-201ENST00000330452 DEPTORQ8TB45 409 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 ACER1Q8TDN7 264 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 CASKIN2Q8WXE0 1202 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 CENPTQ96BT3 561 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 FAM20AQ96MK3 541 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 SRPK1Q96SB4 655 aaKnown RBP18.26■□□□□ 0.51
PRKCD-201ENST00000330452 IDI2Q9BXS1 227 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 CYP39A1Q9NYL5 469 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 PDP2Q9P2J9 529 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 SUCLA2Q9P2R7 463 aaPredicted RBP18.26■□□□□ 0.51
PRKCD-201ENST00000330452 NAGPAQ9UK23 515 aa18.26■□□□□ 0.51
PRKCD-201ENST00000330452 FAM170AA1A519 330 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 TBCAO75347 108 aaKnown RBP18.25■□□□□ 0.51
PRKCD-201ENST00000330452 BMP3P12645 472 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 ETS2P15036 469 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 STIP1P31948 543 aaKnown RBP18.25■□□□□ 0.51
PRKCD-201ENST00000330452 HSD17B3P37058 310 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 DHX9Q08211 1270 aaKnown RBP18.25■□□□□ 0.51
PRKCD-201ENST00000330452 MUM1Q2TAK8 710 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 ZC2HC1CQ53FD0 456 aaPredicted RBP18.25■□□□□ 0.51
PRKCD-201ENST00000330452 ALKBH5Q6P6C2 394 aaKnown RBP18.25■□□□□ 0.51
PRKCD-201ENST00000330452 KSR1Q8IVT5 923 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 SCUBE1Q8IWY4 988 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 LRRC34Q8IZ02 419 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 STKLD1Q8NE28 680 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 SLC35C1Q96A29 364 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 PBKQ96KB5 322 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 SIX2Q9NPC8 291 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 TYW1Q9NV66 732 aaKnown RBP18.25■□□□□ 0.51
PRKCD-201ENST00000330452 ITGB1BP2Q9UKP3 347 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 RABL2BQ9UNT1 228 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 ITM2BQ9Y287 266 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 RABGAP1Q9Y3P9 1069 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 RAD51CO43502 376 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 CHMP2AO43633 222 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 TJP3O95049 919 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 FOSP01100 380 aaPredicted RBP18.25■□□□□ 0.51
PRKCD-201ENST00000330452 RPS6KA1Q15418 735 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 OLFML2BQ68BL8 750 aa18.25■□□□□ 0.51
PRKCD-201ENST00000330452 RBBP8NLQ8NC74 664 aaPredicted RBP18.25■□□□□ 0.51
PRKCD-201ENST00000330452 GLIS2Q9BZE0 524 aaPredicted RBP18.25■□□□□ 0.51
PRKCD-201ENST00000330452 TROVE2P10155 538 aaKnown RBP eCLIP18.24■□□□□ 0.51
PRKCD-201ENST00000330452 NMT1P30419 496 aaKnown RBP18.24■□□□□ 0.51
PRKCD-201ENST00000330452 HPCAP84074 193 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 RINT1Q6NUQ1 792 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 USP38Q8NB14 1042 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 GMCL1P1Q8NEA9 526 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 TAF4BQ92750 862 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 GMCL1Q96IK5 515 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 ZNF333Q96JL9 665 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 ARHGEF38Q9NXL2 777 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 GCNT4Q9P109 453 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 TGFB1I1O43294 461 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 CIITAP33076 1130 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 UBXN2AP68543 259 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 UAP1Q16222 522 aaPredicted RBP18.24■□□□□ 0.51
PRKCD-201ENST00000330452 TPH2Q8IWU9 490 aa18.24■□□□□ 0.51
PRKCD-201ENST00000330452 TUBA8Q9NY65 449 aaPredicted RBP18.24■□□□□ 0.51
PRKCD-201ENST00000330452 ASTN2O75129 1339 aaPredicted RBP18.24■□□□□ 0.51
PRKCD-201ENST00000330452 EYA4O95677 639 aa18.23■□□□□ 0.51
PRKCD-201ENST00000330452 BAG6P46379 1132 aa18.23■□□□□ 0.51
PRKCD-201ENST00000330452 CNOT10Q9H9A5 744 aaKnown RBP18.23■□□□□ 0.51
PRKCD-201ENST00000330452 PRR12Q9ULL5 1215 aa18.23■□□□□ 0.51
PRKCD-201ENST00000330452 MAGEA13PA6NCF6 341 aa18.23■□□□□ 0.51
PRKCD-201ENST00000330452 LDHAP00338 332 aaKnown RBP18.23■□□□□ 0.51
PRKCD-201ENST00000330452 BMT2Q1RMZ1 405 aa18.23■□□□□ 0.51
PRKCD-201ENST00000330452 GATA6Q92908 595 aa18.23■□□□□ 0.51
PRKCD-201ENST00000330452 UTP4Q969X6 686 aaKnown RBP18.23■□□□□ 0.51
PRKCD-201ENST00000330452 WDR18Q9BV38 432 aa18.23■□□□□ 0.51
PRKCD-201ENST00000330452 PFDN4Q9NQP4 134 aa18.23■□□□□ 0.51
PRKCD-201ENST00000330452 SERPINA10Q9UK55 444 aa18.23■□□□□ 0.51
PRKCD-201ENST00000330452 ATAD5Q96QE3 1844 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 CENPFP49454 3210 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 SIGLEC16A6NMB1 481 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 CFBP00751 764 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 MTTPP55157 894 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 ITGA7Q13683 1181 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 COG2Q14746 738 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 MYCT1Q8N699 235 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 ENDOVQ8N8Q3 282 aaKnown RBP18.22■□□□□ 0.51
PRKCD-201ENST00000330452 LRRC57Q8N9N7 239 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 DYDC2Q96IM9 177 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 CATSPER2Q96P56 530 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.22■□□□□ 0.51
PRKCD-201ENST00000330452 IGLV3-22A0A075B6J6 115 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 ATP9AO75110 1047 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 SH3BGRP55822 239 aaPredicted RBP18.22■□□□□ 0.51
PRKCD-201ENST00000330452 PRAMEF18Q5VWM3 479 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 DDX23Q9BUQ8 820 aaKnown RBP18.22■□□□□ 0.51
PRKCD-201ENST00000330452 AP1M1Q9BXS5 423 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 NMRK1Q9NWW6 199 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 PNMA3Q9UL41 463 aa18.22■□□□□ 0.51
PRKCD-201ENST00000330452 BTNL10A8MVZ5 291 aa18.21■□□□□ 0.51
PRKCD-201ENST00000330452 DDX3XO00571 662 aaKnown RBP eCLIP18.21■□□□□ 0.511e-7■■□□□ 13.4
PRKCD-201ENST00000330452 NVLO15381 856 aaKnown RBP18.21■□□□□ 0.51
PRKCD-201ENST00000330452 PDGFRBP09619 1106 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms