RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 GMNNO75496 209 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 C1orf228Q6PIY5 440 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 PALMDQ9NP74 551 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 EPS15L1Q9UBC2 864 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 PFASO15067 1338 aa17.57■□□□□ 0.4
PACS1-201ENST00000320580 KLRC4O43908 158 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 USP17L8P0C7I0 530 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 ABL2P42684 1182 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 TROAPQ12815 778 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 WDR78Q5VTH9 848 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 DUPD1Q68J44 220 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 NUDCD3Q8IVD9 361 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 AGPAT1Q99943 283 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 PSMC3IPQ9P2W1 217 aaPredicted RBP17.56■□□□□ 0.4
PACS1-201ENST00000320580 MYL2P10916 166 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 RRP1BQ14684 758 aaKnown RBP17.56■□□□□ 0.4
PACS1-201ENST00000320580 TRMT5Q32P41 509 aaKnown RBP17.56■□□□□ 0.4
PACS1-201ENST00000320580 AADACL2Q6P093 401 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 KLHL4Q9C0H6 718 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 BARHL2Q9NY43 387 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 LMCD1Q9NZU5 365 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 ZBTB1Q9Y2K1 713 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 SH3GLB1Q9Y371 365 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 NEU2Q9Y3R4 380 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 KRT1P04264 644 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 EEF1B2P24534 225 aaKnown RBP17.56■□□□□ 0.4
PACS1-201ENST00000320580 AP1B1Q10567 949 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 SGSM1Q2NKQ1 1148 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 PATL1Q86TB9 770 aaKnown RBP17.56■□□□□ 0.4
PACS1-201ENST00000320580 ZNF554Q86TJ5 538 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 MXD3Q9BW11 206 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 UBE2OQ9C0C9 1292 aaKnown RBP17.56■□□□□ 0.4
PACS1-201ENST00000320580 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.56■□□□□ 0.4
PACS1-201ENST00000320580 GNPATO15228 680 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 HIBADHP31937 336 aaKnown RBP17.56■□□□□ 0.4
PACS1-201ENST00000320580 ARHGAP4P98171 946 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 ARID3BQ8IVW6 561 aaPredicted RBP17.56■□□□□ 0.4
PACS1-201ENST00000320580 ZSWIM1Q9BR11 485 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 GRIP2Q9C0E4 1043 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 SAR1AQ9NR31 198 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 LRRC42Q9Y546 428 aa17.56■□□□□ 0.4
PACS1-201ENST00000320580 KRT10P13645 584 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 CREB1P16220 341 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 ATXN3P54252 364 aaPredicted RBP17.55■□□□□ 0.4
PACS1-201ENST00000320580 MFAP3P55082 362 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 ARL4CP56559 192 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 RASA2Q15283 850 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 LRRC47Q8N1G4 583 aaKnown RBP17.55■□□□□ 0.4
PACS1-201ENST00000320580 TMEM120AQ9BXJ8 343 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 IMPG2Q9BZV3 1241 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 DRC3Q9H069 523 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 BHMT2Q9H2M3 363 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 CEMIPQ8WUJ3 1361 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 LOC100653049A0A140TA62 436 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 A6NHS1 94 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 KRT34O76011 436 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 STK10O94804 968 aaKnown RBP17.55■□□□□ 0.4
PACS1-201ENST00000320580 RFC4P35249 363 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 KLHL38Q2WGJ6 581 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 DDX3XO00571 662 aaKnown RBP eCLIP17.55■□□□□ 0.48e-9■■■■□ 23.9
PACS1-201ENST00000320580 MAGEA8P43361 318 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 GJA8P48165 433 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 IGBP1P78318 339 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 BSPRYQ5W0U4 402 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 USP6NLQ92738 828 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 MPHOSPH6Q99547 160 aaKnown RBP17.55■□□□□ 0.4
PACS1-201ENST00000320580 INTS2Q9H0H0 1204 aaKnown RBP17.55■□□□□ 0.4
PACS1-201ENST00000320580 RTCBQ9Y3I0 505 aaKnown RBP17.55■□□□□ 0.4
PACS1-201ENST00000320580 STARD13Q9Y3M8 1113 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 FLT1P17948 1338 aa17.55■□□□□ 0.4
PACS1-201ENST00000320580 A8MXQ7 604 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 C4orf50Q6ZRC1 276 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 DDHD1Q8NEL9 900 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 TBC1D16Q8TBP0 767 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 CFAP36Q96G28 342 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
PACS1-201ENST00000320580 S100BP04271 92 aaPredicted RBP17.54■□□□□ 0.4
PACS1-201ENST00000320580 ARSEP51690 589 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 SLC45A4Q5BKX6 768 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 RBM44Q6ZP01 1051 aaKnown RBP17.54■□□□□ 0.4
PACS1-201ENST00000320580 ZNF333Q96JL9 665 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 STK33Q9BYT3 514 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 CAAP1Q9H8G2 361 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 FAM205AQ6ZU69 1335 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 K7ENM7 598 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 PON1P27169 355 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 RTP1P59025 263 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 TSHZ1Q6ZSZ6 1077 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 PDZD8Q8NEN9 1154 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 DNAJC1Q96KC8 554 aaKnown RBP17.54■□□□□ 0.4
PACS1-201ENST00000320580 QTRT2Q9H974 415 aaKnown RBP17.54■□□□□ 0.4
PACS1-201ENST00000320580 ETNK2Q9NVF9 386 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 DCCP43146 1447 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 KRT37O76014 449 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 CHRNDQ07001 517 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 ECSITQ9BQ95 431 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 NDEL1Q9GZM8 345 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 ZNF180Q9UJW8 692 aa17.54■□□□□ 0.4
PACS1-201ENST00000320580 SMIM31A0A1B0GVY4 71 aa17.53■□□□□ 0.4
PACS1-201ENST00000320580 H0YGN5 161 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms