RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CCHCR1Q8TD31 782 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 FAM151AQ8WW52 585 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 MFSD14AQ96MC6 490 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 AGPAT1Q99943 283 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 TRIM7Q9C029 511 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 ACP6Q9NPH0 428 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 CHST7Q9NS84 486 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 PRR12Q9ULL5 1215 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 SNX24Q9Y343 169 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 GBF1Q92538 1859 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 TMEM120BA0PK00 339 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 MIF4GDA9UHW6 222 aaKnown RBP5.83□□□□□ -1.48
VPS50-202ENST00000305866 E7ENQ6 273 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 FLOT1O75955 427 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 H2AFZP0C0S5 128 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 BMP3P12645 472 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 COMTP21964 271 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 USP8P40818 1118 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 KCNQ4P56696 695 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 GPX6P59796 221 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 TBC1D25Q3MII6 688 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 WDR72Q3MJ13 1102 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 RFWD3Q6PCD5 774 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 MTHFD1LQ6UB35 978 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 H2AFVQ71UI9 128 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 TRMT10CQ7L0Y3 403 aaKnown RBP5.83□□□□□ -1.48
VPS50-202ENST00000305866 TRABD2AQ86V40 505 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 TMC2Q8TDI7 906 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 SPIRE2Q8WWL2 714 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 CDK5RAP3Q96JB5 506 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 ELAC2Q9BQ52 826 aaKnown RBP5.83□□□□□ -1.48
VPS50-202ENST00000305866 INTS2Q9H0H0 1204 aaKnown RBP5.83□□□□□ -1.48
VPS50-202ENST00000305866 CYP39A1Q9NYL5 469 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 FEM1BQ9UK73 627 aa5.83□□□□□ -1.48
VPS50-202ENST00000305866 CLUHO75153 1309 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 A0A0B4J269 797 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 DNAJC6O75061 913 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 UPP2O95045 317 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 ACADSP16219 412 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 ATP6V1C1P21283 382 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 GPC3P51654 580 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 TUBB3Q13509 450 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 LONRF1Q17RB8 773 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 PPP1R15BQ5SWA1 713 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 SEPT14Q6ZU15 432 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 PEX26Q7Z412 305 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 RHOT2Q8IXI1 618 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 C4orf19Q8IY42 314 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS50-202ENST00000305866 CEP120Q8N960 986 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 UBLCP1Q8WVY7 318 aaPredicted RBP5.82□□□□□ -1.48
VPS50-202ENST00000305866 INPP5DQ92835 1189 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 FAM81BQ96LP2 452 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 CCDC114Q96M63 670 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 NACC1Q96RE7 527 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 DENND2DQ9H6A0 471 aaPredicted RBP5.82□□□□□ -1.48
VPS50-202ENST00000305866 RNPEPL1Q9HAU8 725 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 HSFX1Q9UBD0 423 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 PATJQ8NI35 1801 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 TCP11X1B4DZS4 312 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 PDLIM1O00151 329 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 EDF1O60869 148 aaKnown RBP5.82□□□□□ -1.48
VPS50-202ENST00000305866 SGPL1O95470 568 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 ADRB2P07550 413 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 SPATA31D3P0C874 917 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 XRCC5P13010 732 aaKnown RBP5.82□□□□□ -1.48
VPS50-202ENST00000305866 ATP4AP20648 1035 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 ACO1P21399 889 aaKnown RBP5.82□□□□□ -1.48
VPS50-202ENST00000305866 RRM1P23921 792 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 NMT1P30419 496 aaKnown RBP5.82□□□□□ -1.48
VPS50-202ENST00000305866 STAT1P42224 750 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 BTKQ06187 659 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 MYO1EQ12965 1108 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 KRT71Q3SY84 523 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 CCDC38Q502W7 563 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 SPATA31D4Q6ZUB0 917 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 CROCCP2Q86T23 111 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 DAAM2Q86T65 1068 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 KIF2BQ8N4N8 673 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 CCDC63Q8NA47 563 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 ZNF622Q969S3 477 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS50-202ENST00000305866 THOC1Q96FV9 657 aaKnown RBP5.82□□□□□ -1.48
VPS50-202ENST00000305866 NGLY1Q96IV0 654 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 BTBD6Q96KE9 485 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 MXRA8Q9BRK3 442 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 DCLK3Q9C098 648 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 OCEL1Q9H607 264 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 TMEM206Q9H813 350 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 SSU72Q9NP77 194 aaKnown RBP5.82□□□□□ -1.48
VPS50-202ENST00000305866 ANKEF1Q9NU02 776 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 GGT7Q9UJ14 662 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 DNAJC12Q9UKB3 198 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.82□□□□□ -1.48
VPS50-202ENST00000305866 PCDHAC2Q9Y5I4 1007 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 SYNGAP1Q96PV0 1343 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 ICAM1P05362 532 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 CFHP08603 1231 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 FAM163BP0C2L3 166 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 GRIA2P42262 883 aa5.82□□□□□ -1.48
VPS50-202ENST00000305866 PRPF4BQ13523 1007 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms