RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ZC2HC1CQ53FD0 456 aaPredicted RBP18.24■□□□□ 0.51
SHANK1-201ENST00000293441 TFRCP02786 760 aaKnown RBP18.24■□□□□ 0.51
SHANK1-201ENST00000293441 GNASQ5JWF2 1037 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 TBC1D1Q86TI0 1168 aaPredicted RBP18.24■□□□□ 0.51
SHANK1-201ENST00000293441 RAB42Q8N4Z0 105 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 MCEEQ96PE7 176 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 CSF1RP07333 972 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 RFC5P40937 340 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 PDCLQ13371 301 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 TAF11Q15544 211 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 FBXO38Q6PIJ6 1188 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 ATP11CQ8NB49 1132 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 MED15Q96RN5 788 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 CLCA2Q9UQC9 943 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 GRAP2O75791 330 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 PEX19P40855 299 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 GYS2P54840 703 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 GTF2H3Q13889 308 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 ANKRD13AQ8IZ07 590 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 MADDQ8WXG6 1647 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 BCORL1Q5H9F3 1711 aa18.24■□□□□ 0.51
SHANK1-201ENST00000293441 HIBCHQ6NVY1 386 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-201ENST00000293441 METTL16Q86W50 562 aaKnown RBP18.23■□□□□ 0.51
SHANK1-201ENST00000293441 NUDCD3Q8IVD9 361 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 CLMNQ96JQ2 1002 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 TRIM4Q9C037 500 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 CAPN11Q9UMQ6 739 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 TADA3O75528 432 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 GGCXP38435 758 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 GLB1LQ6UWU2 654 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 FAM49BQ9NUQ9 324 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 ERAP1Q9NZ08 941 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 IQSEC2Q5JU85 1478 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 NPTXRO95502 500 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 SERPIND1P05546 499 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 PDGFRAP16234 1089 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 SNX17Q15036 470 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 SV2CQ496J9 727 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 SYTL3Q4VX76 610 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 ATPAF2Q8N5M1 289 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 ATG4CQ96DT6 458 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 TMEM60Q9H2L4 133 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 SH3BP1Q9Y3L3 701 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 SH3BGRP55822 239 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-201ENST00000293441 BARGINQ6ZT62 677 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 TEKT4Q8WW24 435 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 ZKSCAN4Q969J2 545 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-201ENST00000293441 BTBD6Q96KE9 485 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 YIPF2Q9BWQ6 316 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 ACTR5Q9H9F9 607 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-201ENST00000293441 CCDC78A2IDD5 438 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 RBBP8NLQ8NC74 664 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-201ENST00000293441 POLR3CQ9BUI4 534 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-201ENST00000293441 CCSER1Q9C0I3 900 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 PCDHB8Q9UN66 801 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 ACBD5Q5T8D3 534 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-201ENST00000293441 CHST13Q8NET6 341 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 SLC38A7Q9NVC3 462 aa18.23■□□□□ 0.51
SHANK1-201ENST00000293441 FMO5P49326 533 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 EFHBQ8N7U6 833 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 JMJD4Q9H9V9 463 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 ADA2Q9NZK5 511 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 KIF17Q9P2E2 1029 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 A0A1W2PQC6 194 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 ATP1A1P05023 1023 aaKnown RBP18.22■□□□□ 0.51
SHANK1-201ENST00000293441 RPS12P25398 132 aaKnown RBP18.22■□□□□ 0.51
SHANK1-201ENST00000293441 PPP1R36Q96LQ0 422 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.22■□□□□ 0.51
SHANK1-201ENST00000293441 FAM187AA6NFU0 413 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 C2CD2LO14523 706 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 IL18RAPO95256 599 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 KCNA2P16389 499 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 SLC1A1P43005 524 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 FCGRTP55899 365 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 SENP7Q9BQF6 1050 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 TAF1DQ9H5J8 278 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-201ENST00000293441 TRIM45Q9H8W5 580 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-201ENST00000293441 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.22■□□□□ 0.51
SHANK1-201ENST00000293441 TSGA10IPQ3SY00 556 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 FBXO33Q7Z6M2 555 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 SLC35G2Q8TBE7 412 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 NRBF2Q96F24 287 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 CEP19Q96LK0 163 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 ADGRG1Q9Y653 693 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 GNL1P36915 607 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-201ENST00000293441 PCSK7Q16549 785 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 RCOR2Q8IZ40 523 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 RNPC3Q96LT9 517 aaKnown RBP18.22■□□□□ 0.51
SHANK1-201ENST00000293441 C7orf25Q9BPX7 421 aa18.22■□□□□ 0.51
SHANK1-201ENST00000293441 EPB41L4AQ9HCS5 686 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-201ENST00000293441 MED14O60244 1454 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 MYMKA6NI61 221 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 TLR2O60603 784 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 BRAFP15056 766 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 MAP4P27816 1152 aaKnown RBP18.21■□□□□ 0.51
SHANK1-201ENST00000293441 CCDC144BQ3MJ40 725 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms