RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 A0A1B0GW55 424 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 DUX4L2P0CJ85 424 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 DUX4L3P0CJ86 424 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 DUX4L4P0CJ87 422 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 DUX4L5P0CJ88 424 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 DUX4L6P0CJ89 424 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 DUX4L7P0CJ90 424 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 MAPRE2Q15555 327 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 SPATA21Q7Z572 469 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 DUX4Q9UBX2 424 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 ATP1A1P05023 1023 aaKnown RBP13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 NPHP3-ACAD11A0A0J9YXS1 232 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 SERPINB4P48594 390 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 NME5P56597 212 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 TPI1P60174 286 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 CDC16Q13042 620 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 OR2W6PQ8NHA6 318 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 SH3RF3Q8TEJ3 882 aaPredicted RBP13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 CPA5Q8WXQ8 436 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 ATP6V1G3Q96LB4 118 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 SHROOM1Q2M3G4 852 aaPredicted RBP13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 SNRNP48Q6IEG0 339 aaKnown RBP13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 CENPPQ6IPU0 288 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 TLK2Q86UE8 772 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 P3H2Q8IVL5 708 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 SHCBP1Q8NEM2 672 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 WNK4Q96J92 1243 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 POLR3FQ9H1D9 316 aaPredicted RBP13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 COASYQ13057 564 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 NR1H3Q13133 447 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 ZNF302Q9NR11 478 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 ZFYVE9O95405 1425 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 LOC102724428A0A0B4J2F2 783 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 PRPF3O43395 683 aaKnown RBP13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 SIK1P57059 783 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 TUBGCP3Q96CW5 907 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 TRIM51Q9BSJ1 452 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 TSSK1BQ9BXA7 367 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 WWP1Q9H0M0 922 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 MUC3BQ9H195 1237 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 PLEKHA5Q9HAU0 1116 aa13.09□□□□□ -0.31
ARFGEF1-201ENST00000262215 CYP26A1O43174 497 aa13.08□□□□□ -0.31
ARFGEF1-201ENST00000262215 PHKG2P15735 406 aa13.08□□□□□ -0.31
ARFGEF1-201ENST00000262215 TWF1Q12792 350 aa13.08□□□□□ -0.31
ARFGEF1-201ENST00000262215 CDKL3Q8IVW4 592 aaPredicted RBP13.08□□□□□ -0.31
ARFGEF1-201ENST00000262215 SMARCAD1Q9H4L7 1026 aa13.08□□□□□ -0.31
ARFGEF1-201ENST00000262215 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.08□□□□□ -0.31
ARFGEF1-201ENST00000262215 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.08□□□□□ -0.31
ARFGEF1-201ENST00000262215 DIS3Q9Y2L1 958 aaKnown RBP13.08□□□□□ -0.31
ARFGEF1-201ENST00000262215 PRAG1Q86YV5 1406 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 NDUFS3O75489 264 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 PDGFRBP09619 1106 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 PTPRN2Q92932 1015 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 STAMBPL1Q96FJ0 436 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 ZBTB1Q9Y2K1 713 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 MIF4GDA9UHW6 222 aaKnown RBP13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 SRP72O76094 671 aaKnown RBP13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 CHN1P15882 459 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 PRELPP51888 382 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 HPCAP84074 193 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 P3H1Q32P28 736 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 FAM136AQ96C01 138 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 ARHGEF38Q9NXL2 777 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 FAM107AO95990 144 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 HSPA9P38646 679 aaKnown RBP13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 SGF29Q96ES7 293 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 C16orf96A6NNT2 1141 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 TEX33O43247 280 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 AKR1B1P15121 316 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 TMEM62Q0P6H9 643 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 OPTNQ96CV9 577 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 N6AMT1Q9Y5N5 214 aa13.08□□□□□ -0.32
ARFGEF1-201ENST00000262215 ERVV-2B6SEH9 535 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 SASH1O94885 1247 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 FEN1P39748 380 aaKnown RBP13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 DEFA1P59665 94 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 DEFA3P59666 94 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 TNFAIP2Q03169 654 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 PDLIM2Q96JY6 352 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 C9orf72Q96LT7 481 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 RCOR1Q9UKL0 485 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 USP17L10C9JJH3 530 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 CTSHP09668 335 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 MLNP12872 115 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 CAV1Q03135 178 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 KRT78Q8N1N4 520 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 SMARCAL1Q9NZC9 954 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 SPATA2Q9UM82 520 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 C21orf2O43822 256 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 POU1F1P28069 291 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 ABCE1P61221 599 aaKnown RBP13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 DDX39BQ13838 428 aaKnown RBP13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 UNC13DQ70J99 1090 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 HPS3Q969F9 1004 aa13.07□□□□□ -0.32
ARFGEF1-201ENST00000262215 FOPNLQ96NB1 174 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms