RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ORC2Q13416 577 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-201ENST00000225964 CUL3Q13618 768 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 WDR72Q3MJ13 1102 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 MFSD4BQ5TF39 518 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 ANGEL2Q5VTE6 544 aaKnown RBP13.95□□□□□ -0.18
COL1A1-201ENST00000225964 SUPT3HO75486 399 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 AP1ARQ63HQ0 302 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 EMBQ6PCB8 327 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 CPA5Q8WXQ8 436 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 PABPC5Q96DU9 382 aaKnown RBP13.95□□□□□ -0.18
COL1A1-201ENST00000225964 ZFP42Q96MM3 310 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 AGPAT1Q99943 283 aa13.95□□□□□ -0.18
COL1A1-201ENST00000225964 SUPT3HB4E1H0 165 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 KCNQ2O43526 872 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 CELF2O95319 508 aaKnown RBP13.94□□□□□ -0.18
COL1A1-201ENST00000225964 LRG1P02750 347 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 DMC1Q14565 340 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 MDH1BQ5I0G3 518 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 FAM161BQ96MY7 647 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 CD274Q9NZQ7 290 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 CDHR2Q9BYE9 1310 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 ETFBP38117 255 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 CLCN6P51797 869 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 ARFIP2P53365 341 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 SREBF2Q12772 1141 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 NFIXQ14938 502 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 PRAMEF18Q5VWM3 479 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 GRAMD4Q6IC98 578 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 SMIM5Q71RC9 77 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 MED15Q96RN5 788 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL1A1-201ENST00000225964 SPATA16Q9BXB7 569 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 C3orf70A6NLC5 250 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-201ENST00000225964 AP2B1P63010 937 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 TWF1Q12792 350 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 BAATQ14032 418 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-201ENST00000225964 OSBPL9Q96SU4 736 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 ARHGEF38Q9NXL2 777 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 ADGRA2Q96PE1 1338 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 PRR23AA6NEV1 266 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 GRIN3BO60391 1043 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 CUL4AQ13619 759 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 TJAP1Q5JTD0 557 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 TMED8Q6PL24 325 aaPredicted RBP13.94□□□□□ -0.18
COL1A1-201ENST00000225964 HSPBP1Q9NZL4 362 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 KRT87PA6NCN2 255 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 RTN2O75298 545 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 SV2CQ496J9 727 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 TRIM48Q8IWZ4 208 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 TMCO5AQ8N6Q1 288 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 CAPN10Q9HC96 672 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 AURKCQ9UQB9 309 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 PRR36Q9H6K5 1346 aa13.94□□□□□ -0.18
COL1A1-201ENST00000225964 EYA4O95677 639 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 MAPRE2Q15555 327 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 SH2D3AQ9BRG2 576 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 SLC30A1Q9Y6M5 507 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 SOAT1P35610 550 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 LRRC14Q15048 493 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 GAS2L3Q86XJ1 694 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 RALBP11234 206 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 SLC30A5Q8TAD4 765 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 ECT2Q9H8V3 914 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 ALG13Q9NP73 1137 aaKnown RBP13.93□□□□□ -0.18
COL1A1-201ENST00000225964 CCL15-CCL14A0A0B4J2E2 113 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 CCL15Q16663 113 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 TKFCQ3LXA3 575 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 KCNV2Q8TDN2 545 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 C18orf8Q96DM3 657 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 CD4P01730 458 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 NUP93Q8N1F7 819 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 ZSCAN32Q9NX65 697 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 EHD2Q9NZN4 543 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 ZNF189O75820 626 aaPredicted RBP13.93□□□□□ -0.18
COL1A1-201ENST00000225964 ATP5HO75947 161 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 ALDH18A1P54886 795 aaKnown RBP13.93□□□□□ -0.18
COL1A1-201ENST00000225964 SLC7A14Q8TBB6 771 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 PHF21AQ96BD5 680 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 GGA3Q9NZ52 723 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 ZFATQ9P243 1243 aa13.93□□□□□ -0.18
COL1A1-201ENST00000225964 SCAF8Q9UPN6 1271 aaKnown RBP13.93□□□□□ -0.18
COL1A1-201ENST00000225964 STXBP3O00186 592 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 ANGPT2O15123 496 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 CPT1AP50416 773 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 ARHGAP31Q2M1Z3 1444 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 GRID2IPA4D2P6 1211 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 SCP2P22307 547 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 ACTR2P61160 394 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 HIF1AQ16665 826 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 PTRHD1Q6GMV3 140 aaKnown RBP13.92□□□□□ -0.18
COL1A1-201ENST00000225964 FRMD5Q7Z6J6 570 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 ENTPD7Q9NQZ7 604 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 SLC38A7Q9NVC3 462 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 C19orf81C9J6K1 198 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 IL10P22301 178 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 FGFR4P22455 802 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 HARS2P49590 506 aaKnown RBP13.92□□□□□ -0.18
COL1A1-201ENST00000225964 ICA1LQ8NDH6 482 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 MCEEQ96PE7 176 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 FAM129AQ9BZQ8 928 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms