RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Map3k9Q3U1V8 1077 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Krt35Q497I4 455 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Atp13a3Q5XF89 1219 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 PapolaQ61183 739 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 ThrspQ62264 150 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Tdpoz4Q6YCH2 370 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 SugctQ7TNE1 436 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Impg2Q80XH2 1243 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ccdc181Q80ZU5 509 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Iffo1Q8BXL9 562 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ttc16Q8C1F5 767 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ccdc28bQ8CEG5 200 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Sugp1Q8CH02 643 aaKnown RBP6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 IntS13Q8QZV7 732 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Washc1Q8VDD8 475 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Caap1Q8VDY9 356 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Coa7Q921H9 231 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Tceal1Q921P9 165 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Trim33Q99PP7 1142 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ndufab1Q9CR21 156 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Isl2Q9CXV0 359 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Toe1Q9D2E2 511 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Capn9Q9D805 690 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Tbx18Q9EPZ6 613 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Tlr2Q9QUN7 784 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Grk1Q9WVL4 564 aa6.67□□□□□ -1.34
Lig4-202ENSMUST00000170033 Myo1eE9Q634 1107 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Gm5814J3QP80 125 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Cyp2c68K7N6C2 491 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Gm10436L7N1Y3 520 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Trappc3O55013 180 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Birc5O70201 140 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 rp9P97762 213 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Siah1bQ06985 282 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Lrrc36Q3V0M2 755 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Carmil2Q3V3V9 1296 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Scarf1Q5ND28 820 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Pacsin1Q61644 441 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ttyh3Q6P5F7 524 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Naa35Q6PHQ8 725 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Depdc1bQ8BH88 529 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Gtf3c4Q8BMQ2 817 aaKnown RBP6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Eno4Q8C042 619 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Slc25a38Q91XD8 326 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Mettl13Q91YR5 698 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ppp1r3aQ99MR9 1089 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Xab2Q9DCD2 855 aaKnown RBP6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Lztfl1Q9JHQ5 299 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Orc3Q9JK30 715 aaKnown RBP6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Edf1Q9JMG1 148 aaKnown RBP6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Phtf1Q9QZ09 761 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Stk25Q9Z2W1 426 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Gfpt2Q9Z2Z9 682 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Serpinb6cW4VSP4 379 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Cntnap2Q9CPW0 1332 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Mia3Q8BI84 1930 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ripor3A1L3T7 938 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Cyp2c69E9PXC3 491 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Srsf11E9Q6E5 511 aaKnown RBP6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Plekha5E9Q6H8 1269 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Kcnu1O54982 1121 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Chmp6P0C0A3 200 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Cd44P15379 778 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Tph1P17532 447 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ctnnd1P30999 938 aaKnown RBP6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Psmc5P62196 406 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Mfsd14aP70187 490 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Epas1P97481 874 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Klrb1Q0ZUP1 214 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Muc3aQ3U5A2 218 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Q3UTZ3 580 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Taok1Q5F2E8 1001 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Mtus1Q5HZI1 1210 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 FancbQ5XJY6 703 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 ScinQ60604 715 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Astn1Q61137 1302 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Nrg1Q6DR99 700 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Frmd5Q6P5H6 517 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Tlr11Q6R5P0 926 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 AdalQ80SY6 360 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 C2cd2lQ80X80 706 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ublcp1Q8BGR9 318 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Slc7a4Q8BLQ7 635 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Coq6Q8R1S0 476 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ap3m2Q8R2R9 418 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Kctd5Q8VC57 234 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 AslQ91YI0 464 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ube2sQ921J4 223 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Tex13bQ99MW5 186 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Ankef1Q9D2J7 775 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Fip1l1Q9D824 581 aaKnown RBP6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 GgcxQ9QYC7 757 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Tagln3Q9R1Q8 199 aa6.66□□□□□ -1.34
Lig4-202ENSMUST00000170033 Fyb2A2A995 729 aa6.65□□□□□ -1.34
Lig4-202ENSMUST00000170033 Tbc1d16A2ABG4 766 aa6.65□□□□□ -1.34
Lig4-202ENSMUST00000170033 Gm4297D3YWB7 211 aa6.65□□□□□ -1.34
Lig4-202ENSMUST00000170033 Vmn2r63E9Q0K5 859 aa6.65□□□□□ -1.34
Lig4-202ENSMUST00000170033 Gm9268E9Q0M3 861 aa6.65□□□□□ -1.34
Lig4-202ENSMUST00000170033 Vmn2r62K7N712 859 aa6.65□□□□□ -1.34
Lig4-202ENSMUST00000170033 Casq2O09161 415 aa6.65□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 93.2 ms