RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 PotegA5H0M4 473 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Scgb2b7D3YYY1 112 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Spata31d1dE9Q5W2 1247 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Chrna1P04756 457 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gjb1P28230 283 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Mark2Q05512 776 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Unc5bQ8K1S3 945 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Tbx22Q8K402 517 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Tekt1Q9DAJ2 418 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gtf2h1Q9DBA9 547 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Rnf14Q9JI90 485 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Osbpl9A2A8Z1 736 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gsg1l2M0QWL6 290 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Cfap52Q5F201 620 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 FcgrtQ61559 365 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Sema5aQ62217 1077 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 NostrinQ6WKZ7 506 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 AdalQ80SY6 360 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 RimklbQ80WS1 387 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 PolrmtQ8BKF1 1207 aaKnown RBP16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Calhm6Q8C9E8 313 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ccdc28aQ8CEI3 192 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Hs6st3Q9QYK4 470 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Akt3Q9WUA6 479 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 Zbtb12Q9Z150 459 aa16.98■□□□□ 0.31
Trim39-203ENSMUST00000113706 DgkiD3YWQ0 1071 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 1700064H15RikD3Z4D4 81 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Hoxc6P10629 235 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Vamp7P70280 220 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ptgs2Q05769 604 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ttf2Q5NC05 1138 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Commd10Q8JZY2 202 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Tbc1d15Q9CXF4 671 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Adgra2Q91ZV8 1336 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gm4297D3YWB7 211 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Grm1P97772 1199 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Fam92bQ3V2J0 292 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Snx19Q6P4T1 997 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Celf6Q7TN33 460 aaKnown RBP16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ddx47Q9CWX9 455 aaKnown RBP16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Fam114a1Q9D281 569 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Mrpl2Q9D773 306 aaKnown RBP16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Capn9Q9D805 690 aa16.97■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gm14525B1AZA0 212 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gm2012B1B0R1 212 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Rrm1P07742 792 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Erich4Q3UNU4 136 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Kansl1lQ5DTI6 991 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 OgdhQ60597 1023 aaKnown RBP16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gm14819Q62478 212 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Zdhhc24Q6IR37 284 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Hook3Q8BUK6 718 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Znf830Q8R1N0 363 aaKnown RBP16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Usp4P35123 962 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Fam198aQ3UY90 562 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Tspyl5Q69ZB3 406 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Anks6Q6GQX6 883 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Frmd5Q6P5H6 517 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 D630039A03RikQ8K0M7 236 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ctage5Q8R311 779 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Zfpm1O35615 995 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Tulp2P46686 562 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 GssP51855 474 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ndufs6P52503 116 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Myl6Q60605 151 aaKnown RBP16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Gemin4Q6P6L6 1058 aaKnown RBP16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Ssxb10Q6XAR7 170 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Arrdc3Q7TPQ9 414 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Celf4Q7TSY6 486 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Fgd5Q80UZ0 1219 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Usp27Q8CEG8 438 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 GldcQ91W43 1025 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Prmt7Q922X9 692 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Six6os1Q9CTN5 574 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Znhit2Q9QY66 399 aa16.96■□□□□ 0.31
Trim39-203ENSMUST00000113706 Kng1O08677 661 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Sptlc1O35704 473 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cyp2f2P33267 491 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Wee1P47810 646 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Mettl24Q8CCB5 363 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Vopp1Q8R1C3 172 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ap3m2Q8R2R9 418 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Pcdhac2Q91Y09 1006 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rabl3Q9D4V7 236 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cpne8Q9DC53 577 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Igdcc4Q9EQS9 1252 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Mta2Q9R190 668 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Map7d2A2AG50 781 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Trim5E9PV98 497 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ccdc152E9PX14 254 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Capn2O08529 700 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Pnpla5Q32LZ8 432 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Trmt1Q3TX08 663 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Ctc1Q5SUQ9 1212 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cwf19l2Q8BG79 887 aaKnown RBP16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Grik4Q8BMF5 956 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Lamtor4Q8CF66 99 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Cyp2d26Q8CIM7 500 aa16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Spats2Q8K1N4 545 aaKnown RBP16.95■□□□□ 0.3
Trim39-203ENSMUST00000113706 Rfx5Q9JL61 658 aa16.95■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms