RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W YML018CQ03730 393 aa3.67□□□□□ -1.82
SOF1YLL011W THI7Q05998 598 aa3.67□□□□□ -1.82
SOF1YLL011W MIM1Q08176 113 aa3.67□□□□□ -1.82
SOF1YLL011W MCT1Q12283 360 aa3.67□□□□□ -1.82
SOF1YLL011W BCY1P07278 416 aaKnown RBP3.67□□□□□ -1.82
SOF1YLL011W MSI1P13712 422 aa3.67□□□□□ -1.82
SOF1YLL011W IFM1P25038 676 aa3.67□□□□□ -1.82
SOF1YLL011W GIT1P25346 518 aa3.67□□□□□ -1.82
SOF1YLL011W AEP1P32493 518 aa3.67□□□□□ -1.82
SOF1YLL011W SGE1P33335 543 aa3.67□□□□□ -1.82
SOF1YLL011W KDX1P36005 433 aa3.67□□□□□ -1.82
SOF1YLL011W GPX1P36014 167 aa3.67□□□□□ -1.82
SOF1YLL011W YKL075CP36083 450 aa3.67□□□□□ -1.82
SOF1YLL011W HEK2P38199 381 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SOF1YLL011W MED8P38304 223 aa3.67□□□□□ -1.82
SOF1YLL011W SLX9P53251 210 aaPredicted RBP3.67□□□□□ -1.82
SOF1YLL011W YLR152CP54072 576 aa3.67□□□□□ -1.82
SOF1YLL011W RRP17Q04031 235 aaPredicted RBP3.67□□□□□ -1.82
SOF1YLL011W YET2Q04210 160 aa3.67□□□□□ -1.82
SOF1YLL011W RIF2Q06208 395 aa3.67□□□□□ -1.82
SOF1YLL011W LOA1Q06508 300 aa3.67□□□□□ -1.82
SOF1YLL011W HKR1P41809 1802 aa3.66□□□□□ -1.82
SOF1YLL011W PHO2P07269 559 aa3.66□□□□□ -1.82
SOF1YLL011W CPR4P25334 318 aa3.66□□□□□ -1.82
SOF1YLL011W SPS18P32572 300 aa3.66□□□□□ -1.82
SOF1YLL011W CDC13P32797 924 aaKnown RBP3.66□□□□□ -1.82
SOF1YLL011W SRP14P38985 146 aa3.66□□□□□ -1.82
SOF1YLL011W YND1P40009 630 aa3.66□□□□□ -1.82
SOF1YLL011W KRE29P40026 464 aa3.66□□□□□ -1.82
SOF1YLL011W YER121WP40076 114 aa3.66□□□□□ -1.82
SOF1YLL011W PAN6P40459 309 aa3.66□□□□□ -1.82
SOF1YLL011W YJL213WP40896 331 aa3.66□□□□□ -1.82
SOF1YLL011W EGT2P42835 1041 aa3.66□□□□□ -1.82
SOF1YLL011W PRP24P49960 444 aaKnown RBP3.66□□□□□ -1.82
SOF1YLL011W NSA1P53136 463 aaPredicted RBP3.66□□□□□ -1.82
SOF1YLL011W COQ10Q08058 207 aa3.66□□□□□ -1.82
SOF1YLL011W MMT2Q08970 484 aa3.66□□□□□ -1.82
SOF1YLL011W FLO11P08640 1367 aa3.66□□□□□ -1.82
SOF1YLL011W HHF1P02309 103 aaKnown RBP3.65□□□□□ -1.83
SOF1YLL011W PHO80P20052 293 aa3.65□□□□□ -1.83
SOF1YLL011W DPB2P24482 689 aaPredicted RBP3.65□□□□□ -1.83
SOF1YLL011W ATG15P25641 520 aa3.65□□□□□ -1.83
SOF1YLL011W MAK5P38112 773 aaPredicted RBP3.65□□□□□ -1.83
SOF1YLL011W MRP21P38175 177 aa3.65□□□□□ -1.83
SOF1YLL011W YHR127WP38833 243 aaKnown RBP3.65□□□□□ -1.83
SOF1YLL011W SPL2P38839 148 aa3.65□□□□□ -1.83
SOF1YLL011W PTI1P39927 425 aaPredicted RBP3.65□□□□□ -1.83
SOF1YLL011W YNL208WP40159 199 aaKnown RBP3.65□□□□□ -1.83
SOF1YLL011W YIL067CP40514 678 aa3.65□□□□□ -1.83
SOF1YLL011W YKE4P40544 346 aa3.65□□□□□ -1.83
SOF1YLL011W YNR066CP53752 436 aa3.65□□□□□ -1.83
SOF1YLL011W SNZ2P53824 298 aa3.65□□□□□ -1.83
SOF1YLL011W CWC25P53854 179 aaKnown RBP3.65□□□□□ -1.83
SOF1YLL011W TPS1Q00764 495 aaKnown RBP3.65□□□□□ -1.83
SOF1YLL011W UTP15Q04305 513 aaKnown RBP3.65□□□□□ -1.83
SOF1YLL011W YLR281CQ05863 155 aa3.65□□□□□ -1.83
SOF1YLL011W ARR2Q06597 130 aa3.65□□□□□ -1.83
SOF1YLL011W YPL150WQ12152 901 aa3.65□□□□□ -1.83
SOF1YLL011W YPL245WQ12179 454 aaKnown RBP3.65□□□□□ -1.83
SOF1YLL011W RFM1Q12192 310 aa3.65□□□□□ -1.83
SOF1YLL011W MCK1P21965 375 aaKnown RBP3.64□□□□□ -1.83
SOF1YLL011W YCR043CP25361 127 aa3.64□□□□□ -1.83
SOF1YLL011W SEC1P30619 724 aaKnown RBP3.64□□□□□ -1.83
SOF1YLL011W LDS1P31379 325 aa3.64□□□□□ -1.83
SOF1YLL011W YCR087C-AP37263 153 aa3.64□□□□□ -1.83
SOF1YLL011W AME1P38313 324 aa3.64□□□□□ -1.83
SOF1YLL011W GRE3P38715 327 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SOF1YLL011W LSM12P38828 187 aaKnown RBP3.64□□□□□ -1.83
SOF1YLL011W SNZ3P43545 298 aa3.64□□□□□ -1.83
SOF1YLL011W YJR141WP47172 347 aaPredicted RBP3.64□□□□□ -1.83
SOF1YLL011W COS10P52924 374 aa3.64□□□□□ -1.83
SOF1YLL011W MMS2P53152 137 aa3.64□□□□□ -1.83
SOF1YLL011W CLD1P53264 445 aa3.64□□□□□ -1.83
SOF1YLL011W YOR292CQ08743 309 aa3.64□□□□□ -1.83
SOF1YLL011W RPS8AP0CX39 200 aaKnown RBP3.63□□□□□ -1.83
SOF1YLL011W RPS8BP0CX40 200 aaKnown RBP3.63□□□□□ -1.83
SOF1YLL011W RPL4AP10664 362 aaKnown RBP3.63□□□□□ -1.83
SOF1YLL011W VPH2P32341 215 aa3.63□□□□□ -1.83
SOF1YLL011W MRPL3P36516 390 aa3.63□□□□□ -1.83
SOF1YLL011W RFT1P38206 574 aaPredicted RBP3.63□□□□□ -1.83
SOF1YLL011W FES1P38260 290 aa3.63□□□□□ -1.83
SOF1YLL011W MBA1P38300 278 aa3.63□□□□□ -1.83
SOF1YLL011W PCI8P40512 444 aa3.63□□□□□ -1.83
SOF1YLL011W YJR149WP47177 404 aa3.63□□□□□ -1.83
SOF1YLL011W RPL4BP49626 362 aaKnown RBP3.63□□□□□ -1.83
SOF1YLL011W MSO1P53604 210 aaKnown RBP3.63□□□□□ -1.83
SOF1YLL011W FYV6P53913 173 aa3.63□□□□□ -1.83
SOF1YLL011W SNO1Q03144 224 aa3.63□□□□□ -1.83
SOF1YLL011W RPN8Q08723 338 aaKnown RBP3.63□□□□□ -1.83
SOF1YLL011W SFM1Q12314 213 aa3.63□□□□□ -1.83
SOF1YLL011W YMR316C-AI2HB70 103 aa3.62□□□□□ -1.83
SOF1YLL011W SPT3P06844 337 aa3.62□□□□□ -1.83
SOF1YLL011W QCR2P07257 368 aa3.62□□□□□ -1.83
SOF1YLL011W PUT1P09368 476 aa3.62□□□□□ -1.83
SOF1YLL011W YKR104WP0CE69 306 aa3.62□□□□□ -1.83
SOF1YLL011W SNA3P14359 133 aa3.62□□□□□ -1.83
SOF1YLL011W URA6P15700 204 aa3.62□□□□□ -1.83
SOF1YLL011W DBF2P22204 572 aa3.62□□□□□ -1.83
SOF1YLL011W YCR025CP25352 136 aa3.62□□□□□ -1.83
SOF1YLL011W CSE2P33308 149 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms