RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 E9PMD0 336 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 STK25O00506 426 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 CCL16O15467 120 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 C8AP07357 584 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 NUBP1P53384 320 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 OSTNP61366 133 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 DCAF4L1Q3SXM0 396 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 ASCL5Q7RTU5 278 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 GRASPQ7Z6J2 395 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-213ENST00000641272 C4orf32Q8N8J7 132 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 LNX1Q8TBB1 728 aaPredicted RBP18.39■□□□□ 0.53
PHGDH-213ENST00000641272 HDAC7Q8WUI4 952 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 IRF2BPLQ9H1B7 796 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 POLIQ9UNA4 740 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 PHLPP2Q6ZVD8 1323 aa18.39■□□□□ 0.53
PHGDH-213ENST00000641272 KRBA1A5PL33 1030 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 CCDC169A6NNP5 214 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 I3L4J1 428 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 ST18O60284 1047 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 EIF5BO60841 1220 aaKnown RBP18.38■□□□□ 0.53
PHGDH-213ENST00000641272 HIP1RO75146 1068 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 HARSP12081 509 aaKnown RBP18.38■□□□□ 0.53
PHGDH-213ENST00000641272 CDC25AP30304 524 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 CLCN5P51795 746 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 ZNF568Q3ZCX4 644 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 PPM1LQ5SGD2 360 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 CYP26C1Q6V0L0 522 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 FRMD5Q7Z6J6 570 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 SLC7A14Q8TBB6 771 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 KIFAP3Q92845 792 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 RHOBTB2Q9BYZ6 727 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 NUMBLQ9Y6R0 609 aa18.38■□□□□ 0.53
PHGDH-213ENST00000641272 MYH11P35749 1972 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 CITO14578 2027 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 FSHRP23945 695 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 BRCC3P46736 316 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 TRAPPC10P48553 1259 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 TOB1P50616 345 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-213ENST00000641272 CLCNKBP51801 687 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 PEX3P56589 373 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 PTGDRQ13258 359 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 HTR4Q13639 388 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 ZRSR1Q15695 479 aaKnown RBP18.37■□□□□ 0.53
PHGDH-213ENST00000641272 CCDC105Q8IYK2 499 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 GPR65Q8IYL9 337 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 SLC44A3Q8N4M1 653 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 C3orf58Q8NDZ4 430 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 GPR152Q8TDT2 470 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 ZSCAN31Q96LW9 406 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-213ENST00000641272 PPP1R10Q96QC0 940 aaKnown RBP18.37■□□□□ 0.53
PHGDH-213ENST00000641272 KIF2CQ99661 725 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 RUSC1Q9BVN2 902 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 CDT1Q9H211 546 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-213ENST00000641272 MYO15AQ9UKN7 3530 aa18.37■□□□□ 0.53
PHGDH-213ENST00000641272 PDCD11Q14690 1871 aaKnown RBP18.37■□□□□ 0.53
PHGDH-213ENST00000641272 ZFHX2Q9C0A1 2572 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-213ENST00000641272 PRR23AA6NEV1 266 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 B3GAT3O94766 335 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 SRFP11831 508 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 LAMP2P13473 410 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 MUTP22033 750 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 TKTP29401 623 aaKnown RBP18.36■□□□□ 0.53
PHGDH-213ENST00000641272 OR1D2P34982 312 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 NPTX2P47972 431 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 EFNA5P52803 228 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 SOX4Q06945 474 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-213ENST00000641272 RAD51AP2Q09MP3 1159 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 ERICH6BQ5W0A0 696 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-213ENST00000641272 KCNK18Q7Z418 384 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 DAW1Q8N136 415 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 IGSF22Q8N9C0 903 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 DDX27Q96GQ7 796 aaKnown RBP18.36■□□□□ 0.53
PHGDH-213ENST00000641272 TBC1D17Q9HA65 648 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 HCFC1R1Q9NWW0 138 aa18.36■□□□□ 0.53
PHGDH-213ENST00000641272 K7ERI5 159 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 PAPLNO95428 1278 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 NBL1P41271 181 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 ELAVL2Q12926 359 aaKnown RBP18.35■□□□□ 0.53
PHGDH-213ENST00000641272 DMP1Q13316 513 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-213ENST00000641272 ANGPT1Q15389 498 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 IL17AQ16552 155 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 SPECC1Q5M775 1068 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 RSPO2Q6UXX9 243 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-213ENST00000641272 TAS1R3Q7RTX0 852 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 DTWD2Q8NBA8 298 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 ING5Q8WYH8 240 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 RPP25Q9BUL9 199 aaKnown RBP18.35■□□□□ 0.53
PHGDH-213ENST00000641272 TARS2Q9BW92 718 aaKnown RBP18.35■□□□□ 0.53
PHGDH-213ENST00000641272 ARHGEF3Q9NR81 526 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.35■□□□□ 0.53
PHGDH-213ENST00000641272 MTRRQ9UBK8 725 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 TNFSF13BQ9Y275 285 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 CDY1Q9Y6F8 540 aa18.35■□□□□ 0.53
PHGDH-213ENST00000641272 NOTCH4Q99466 2003 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 MIA3Q5JRA6 1907 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 TMEM189-UBE2V1I3L0A0 370 aa18.34■□□□□ 0.53
PHGDH-213ENST00000641272 U2AF2P26368 475 aaKnown RBP eCLIP18.34■□□□□ 0.534e-10■■□□□ 11.5
PHGDH-213ENST00000641272 MAPK7Q13164 816 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms