RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 POU5F1Q01860 360 aaKnown RBP12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 ZNF365Q70YC5 407 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 CD302Q8IX05 232 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 MFSD14AQ96MC6 490 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 MMRN2Q9H8L6 949 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 UPP2O95045 317 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 AMHP03971 560 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 GLB1LQ6UWU2 654 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 MRPL10Q7Z7H8 261 aaKnown RBP12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 LINC01599Q8WXQ3 324 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 ASB7Q9H672 318 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 RSAD1Q9HA92 442 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 PLEKHA5Q9HAU0 1116 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 TMEM161AQ9NX61 479 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 TAB2Q9NYJ8 693 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 GIT1Q9Y2X7 761 aa12.87□□□□□ -0.35
KCNMA1-289ENST00000640807 FAM189A1O60320 539 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 STX10O60499 249 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 ZNF18P17022 549 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 PSMD6Q15008 389 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 UVSSAQ2YD98 709 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 SLC10A6Q3KNW5 377 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 TMC2Q8TDI7 906 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 VPS16Q9H269 839 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 INPP5FQ9Y2H2 1132 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 ALPK3Q96L96 1907 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 PDE4DIPQ5VU43 2346 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 LACTBL1A8MY62 500 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 BAIAP3O94812 1187 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 CLSTN1O94985 981 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 TRIM49P0CI25 452 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 TRIM49CP0CI26 452 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 FAM189BP81408 668 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 TFAMQ00059 246 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 GSE1Q14687 1217 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 KRT31Q15323 416 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 MAN2A1Q16706 1144 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 GAD1Q99259 594 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 TANC1Q9C0D5 1861 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 HOXA2O43364 376 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 TPM3P06753 285 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 TMEM191BP0C7N4 346 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 MARSP56192 900 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 TRIM59Q8IWR1 403 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 CACTINQ8WUQ7 758 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 KIF12Q96FN5 646 aa12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 ELAC1Q9H777 363 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-289ENST00000640807 TTC26A0AVF1 554 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 FANCCQ00597 558 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 CETN1Q12798 172 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 TCTN1Q2MV58 587 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 PHACTR2O75167 634 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 TNNC2P02585 160 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 MLH1P40692 756 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 BIRC3Q13489 604 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 TMEM132DQ14C87 1099 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 DUOXA2Q1HG44 320 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 FKBP15Q5T1M5 1219 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 AGMOQ6ZNB7 445 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 NPAS4Q8IUM7 802 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 URGCPQ8TCY9 931 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 ANKRD36BP1Q96IX9 119 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 SNX27Q96L92 541 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 ZFP42Q96MM3 310 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 POP1Q99575 1024 aaKnown RBP12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 TRIM5Q9C035 493 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 HSD3B7Q9H2F3 369 aa12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 LIMA1Q9UHB6 759 aaKnown RBP12.85□□□□□ -0.35
KCNMA1-289ENST00000640807 MEIS3P2A8K0S8 358 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 AFPP02771 609 aaKnown RBP12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 UBASH3AP57075 661 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 KCNH2Q12809 1159 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 GLRA4Q5JXX5 417 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 LMBRD2Q68DH5 695 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 ZNF598Q86UK7 904 aaKnown RBP12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 CGRRF1Q99675 332 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 ATF7P17544 494 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 GCLMP48507 274 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 AP3M2P53677 418 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 RNASELQ05823 741 aaKnown RBP12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 FAM117BQ6P1L5 589 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 WDR49Q8IV35 697 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 SLC35C1Q96A29 364 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 BORCS6Q96GS4 357 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 NDST4Q9H3R1 872 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 TTC3P53804 2025 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 CITO14578 2027 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 ARL5CA6NH57 179 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 LRRIQ3A6PVS8 624 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 CBFA2T2O43439 604 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 N4BP1O75113 896 aaKnown RBP12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 MXI1P50539 228 aa12.84□□□□□ -0.35
KCNMA1-289ENST00000640807 WDR5P61964 334 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms