RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ZNF263O14978 683 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 NTSR2O95665 410 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 NOP14P78316 857 aaKnown RBP15.51■□□□□ 0.07
VPS36-207ENST00000611132 DLGAP5Q15398 846 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 NBPF20Q3BBV1 942 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 CLEC10AQ8IUN9 316 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 C1orf131Q8NDD1 294 aaKnown RBP15.51■□□□□ 0.07
VPS36-207ENST00000611132 DEPDC1BQ8WUY9 529 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 TRIM56Q9BRZ2 755 aaKnown RBP15.51■□□□□ 0.07
VPS36-207ENST00000611132 PDP2Q9P2J9 529 aa15.51■□□□□ 0.07
VPS36-207ENST00000611132 RIMS1Q86UR5 1692 aaKnown RBP15.51■□□□□ 0.07
VPS36-207ENST00000611132 CCDC195A0A1B0GUA6 201 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 F5H6K3 240 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 FANCGO15287 622 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 SNUPNO95149 360 aaKnown RBP15.5■□□□□ 0.07
VPS36-207ENST00000611132 PAPOLAP51003 745 aaKnown RBP15.5■□□□□ 0.07
VPS36-207ENST00000611132 KLRC3Q07444 240 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 HIC1Q14526 733 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 DNAL1Q4LDG9 190 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 ICA1LQ8NDH6 482 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 ATP8B4Q8TF62 1192 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 G3BP2Q9UN86 482 aaKnown RBP15.5■□□□□ 0.07
VPS36-207ENST00000611132 TRAF3IP3Q9Y228 551 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 MAGEA13PA6NCF6 341 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 WDR64B1ANS9 1081 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 B2RBV5 119 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 PI4K2BG5E9Z4 385 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 SNX3O60493 162 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 GPC4O75487 556 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 CRCPO75575 148 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 TTC4O95801 387 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 GSTA2P09210 222 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 CENPCQ03188 943 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 EPHA7Q15375 998 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 TRADDQ15628 312 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 DAB2IPQ5VWQ8 1189 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 VGLL2Q8N8G2 317 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 PURBQ96QR8 312 aaKnown RBP15.5■□□□□ 0.07
VPS36-207ENST00000611132 MTRQ99707 1265 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 FAM118BQ9BPY3 351 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 EFHD1Q9BUP0 239 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 TMEM117Q9H0C3 514 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 MYO5BQ9ULV0 1848 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 GOLGA8QA0A0J9YX86 632 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 GOLGA8OA6NCC3 632 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 GOLGA8NF8WBI6 632 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 CAMTA2O94983 1202 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 P4HBP07237 508 aaKnown RBP15.5■□□□□ 0.07
VPS36-207ENST00000611132 SAT1P21673 171 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 BRINP3Q76B58 766 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 MTBPQ96DY7 904 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 C1orf167Q5SNV9 1468 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 A6NJR5 290 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 CAPN9O14815 690 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 UBTFL6P0CB48 400 aaPredicted RBP15.5■□□□□ 0.07
VPS36-207ENST00000611132 RPL21P46778 160 aaKnown RBP15.5■□□□□ 0.07
VPS36-207ENST00000611132 ART3Q13508 389 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 CCDC124Q96CT7 223 aaKnown RBP15.5■□□□□ 0.07
VPS36-207ENST00000611132 FAM213AQ9BRX8 229 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 SLC13A1Q9BZW2 595 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 HSPBP1Q9NZL4 362 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 TACC3Q9Y6A5 838 aa15.5■□□□□ 0.07
VPS36-207ENST00000611132 ARHGAP10A1A4S6 786 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 DENND3A2RUS2 1198 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 GTPBP10A4D1E9 387 aaKnown RBP15.49■□□□□ 0.07
VPS36-207ENST00000611132 TCP10L2B9ZVM9 353 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 DDX3XO00571 662 aaKnown RBP eCLIP15.49■□□□□ 0.07
VPS36-207ENST00000611132 SORBS3O60504 671 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 VEGFAP15692 232 aaPredicted RBP15.49■□□□□ 0.07
VPS36-207ENST00000611132 GNA15P30679 374 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 LRRC55Q6ZSA7 311 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 SLC7A3Q8WY07 619 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 KLC2Q9H0B6 622 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 CYP4F11Q9HBI6 524 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 KIAA1586Q9HCI6 787 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 MED7O43513 233 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 MED24O75448 989 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 PPP2R5CQ13362 524 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 XRCC4Q13426 336 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 FSCBQ5H9T9 825 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 CCT6BQ92526 530 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 FAM196BA6NMK8 535 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 NOP56O00567 594 aaKnown RBP15.49■□□□□ 0.07
VPS36-207ENST00000611132 P4HA2O15460 535 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 TFDP2Q14188 446 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 QPCTQ16769 361 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 THTPAQ9BU02 230 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 SEPT10Q9P0V9 454 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 NXF1Q9UBU9 619 aaKnown RBP15.49■□□□□ 0.07
VPS36-207ENST00000611132 HESX1Q9UBX0 185 aa15.49■□□□□ 0.07
VPS36-207ENST00000611132 PRPSAP2O60256 369 aa15.48■□□□□ 0.07
VPS36-207ENST00000611132 BRD2P25440 801 aaKnown RBP15.48■□□□□ 0.07
VPS36-207ENST00000611132 TFAMQ00059 246 aaKnown RBP15.48■□□□□ 0.07
VPS36-207ENST00000611132 KPNB1Q14974 876 aaKnown RBP15.48■□□□□ 0.07
VPS36-207ENST00000611132 ZNF394Q53GI3 561 aa15.48■□□□□ 0.07
VPS36-207ENST00000611132 TTC16Q8NEE8 873 aa15.48■□□□□ 0.07
VPS36-207ENST00000611132 SCFD2Q8WU76 684 aa15.48■□□□□ 0.07
VPS36-207ENST00000611132 ATG4AQ8WYN0 398 aa15.48■□□□□ 0.07
VPS36-207ENST00000611132 PRCCQ92733 491 aaPredicted RBP15.48■□□□□ 0.07
VPS36-207ENST00000611132 GH2P01242 217 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms