RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 RBM43Q6ZSC3 357 aaKnown RBP20.83■□□□□ 0.93
DDX39A-214ENST00000590556 XXYLT1Q8NBI6 393 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 CLP1Q92989 425 aaKnown RBP20.83■□□□□ 0.93
DDX39A-214ENST00000590556 FAM212AQ96EL1 285 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 FAM193BQ96PV7 902 aaPredicted RBP20.83■□□□□ 0.93
DDX39A-214ENST00000590556 TGS1Q96RS0 853 aaKnown RBP20.83■□□□□ 0.93
DDX39A-214ENST00000590556 TSG101Q99816 390 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 CWH43Q9H720 699 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 CNTN3Q9P232 1028 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 HCSTQ9UBK5 93 aa20.83■□□□□ 0.93
DDX39A-214ENST00000590556 SMIM28A0A1B0GU29 152 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 TTC26A0AVF1 554 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 ZNF233A6NK53 670 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 LACTBL1A8MY62 500 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 THP07101 528 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 NFKBIBQ15653 356 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 GLRA4Q5JXX5 417 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 CENPPQ6IPU0 288 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 ZNF280BQ86YH2 543 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 SLC9A9Q8IVB4 645 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 CD302Q8IX05 232 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 P2RX5Q93086 422 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 NRDE2Q9H7Z3 1164 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 AAASQ9NRG9 546 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 PLAGL2Q9UPG8 496 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 RWDD3Q9Y3V2 267 aa20.82■□□□□ 0.92
DDX39A-214ENST00000590556 TMEM265A0A087WTH1 108 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 TULP1O00294 542 aaPredicted RBP20.81■□□□□ 0.92
DDX39A-214ENST00000590556 EXOC3O60645 756 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 DDHD2O94830 711 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 ADRB2P07550 413 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 KCNE1P15382 129 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 LAG3P18627 525 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 CCNE1P24864 410 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 RPL13P26373 211 aaKnown RBP20.81■□□□□ 0.92
DDX39A-214ENST00000590556 NLRP12P59046 1061 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 ERVK-21P61565 698 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 MYBPC2Q14324 1141 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 EDRF1Q3B7T1 1238 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 ZCWPW2Q504Y3 356 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 CBWD2Q8IUF1 395 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 BRSK2Q8IWQ3 736 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 MLKLQ8NB16 471 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 RDH13Q8NBN7 331 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 TMEM174Q8WUU8 243 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 NELFBQ8WX92 580 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 FBXL18Q96ME1 805 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 SAMD11Q96NU1 681 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 C17orf80Q9BSJ5 609 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 DMAC2Q9NW81 257 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 RBAKQ9NYW8 714 aaPredicted RBP20.81■□□□□ 0.92
DDX39A-214ENST00000590556 LAMA3Q16787 3333 aa20.81■□□□□ 0.92
DDX39A-214ENST00000590556 RALGAPA2Q2PPJ7 1873 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 NLRC5Q86WI3 1866 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 ZC3H11AO75152 810 aaKnown RBP eCLIP20.8■□□□□ 0.92
DDX39A-214ENST00000590556 IL18RAPO95256 599 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 LINC00271P0C7V0 271 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 NR2F2P24468 414 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 CTNNB1P35222 781 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 BMPR1AP36894 532 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 LRRC63Q05C16 580 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 SNRNP35Q16560 246 aaKnown RBP20.8■□□□□ 0.92
DDX39A-214ENST00000590556 NFIL3Q16649 462 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 ANKRD40Q6AI12 368 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 SASS6Q6UVJ0 657 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 SPRED2Q7Z698 418 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 COLGALT1Q8NBJ5 622 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 KIF12Q96FN5 646 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 ZMAT2Q96NC0 199 aaKnown RBP20.8■□□□□ 0.92
DDX39A-214ENST00000590556 ZNF558Q96NG5 402 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 PPP1R10Q96QC0 940 aaKnown RBP20.8■□□□□ 0.92
DDX39A-214ENST00000590556 TSPAN18Q96SJ8 248 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 ZNF576Q9H609 170 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 ASB7Q9H672 318 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 CERS4Q9HA82 394 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 SLC38A7Q9NVC3 462 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 DNAJB4Q9UDY4 337 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 MTUS1Q9ULD2 1270 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 CTNND2Q9UQB3 1225 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 PCDHB12Q9Y5F1 795 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 KIAA1671Q9BY89 1806 aa20.8■□□□□ 0.92
DDX39A-214ENST00000590556 ALDH7A1P49419 539 aaKnown RBP20.79■□□□□ 0.92
DDX39A-214ENST00000590556 PMS1P54277 932 aaKnown RBP20.79■□□□□ 0.92
DDX39A-214ENST00000590556 BCAR1P56945 870 aa20.79■□□□□ 0.92
DDX39A-214ENST00000590556 SPAG1Q07617 926 aa20.79■□□□□ 0.92
DDX39A-214ENST00000590556 DSC1Q08554 894 aa20.79■□□□□ 0.92
DDX39A-214ENST00000590556 ADAM9Q13443 819 aa20.79■□□□□ 0.92
DDX39A-214ENST00000590556 TUSC3Q13454 348 aa20.79■□□□□ 0.92
DDX39A-214ENST00000590556 EPC2Q52LR7 807 aa20.79■□□□□ 0.92
DDX39A-214ENST00000590556 KCNT2Q6UVM3 1135 aa20.79■□□□□ 0.92
DDX39A-214ENST00000590556 COLGALT2Q8IYK4 626 aa20.79■□□□□ 0.92
DDX39A-214ENST00000590556 TMEM175Q9BSA9 504 aa20.79■□□□□ 0.92
DDX39A-214ENST00000590556 FRMD4BQ9Y2L6 1034 aa20.79■□□□□ 0.92
DDX39A-214ENST00000590556 ANK1P16157 1881 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 PDCD11Q14690 1871 aaKnown RBP20.78■□□□□ 0.92
DDX39A-214ENST00000590556 BICDL2A1A5D9 508 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 CARNS1A5YM72 827 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 TRIM49BA6NDI0 452 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 B4GALT3O60512 393 aa20.78■□□□□ 0.92
DDX39A-214ENST00000590556 ALDH2P05091 517 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms