RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 SRGAP2CP0DJJ0 459 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 CEACAM1P13688 526 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 FCARP24071 287 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 GNA11P29992 359 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 HOXA11P31270 313 aaPredicted RBP6.56□□□□□ -1.36
SMG6-219ENST00000575663 CIITAP33076 1130 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 RAP1GAPP47736 663 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 KPNA1P52294 538 aaPredicted RBP6.56□□□□□ -1.36
SMG6-219ENST00000575663 MLLT6P55198 1093 aaPredicted RBP6.56□□□□□ -1.36
SMG6-219ENST00000575663 RAB33AQ14088 237 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 GAS6Q14393 721 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 ELF2Q15723 593 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 RTN1Q16799 776 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 SLC5A9Q2M3M2 681 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 PLA2G2CQ5R387 149 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 SH3PXD2AQ5TCZ1 1133 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.56□□□□□ -1.36
SMG6-219ENST00000575663 Q6ZS52 159 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 MAP4K3Q8IVH8 894 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 ELMOD1Q8N336 334 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 RNF149Q8NC42 400 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 EXOC6Q8TAG9 804 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 LNX1Q8TBB1 728 aaPredicted RBP6.56□□□□□ -1.36
SMG6-219ENST00000575663 BICD2Q8TD16 824 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 TCP11Q8WWU5 503 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 ASB16Q96NS5 453 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 SH2D3AQ9BRG2 576 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 EIF2AQ9BY44 585 aaKnown RBP6.56□□□□□ -1.36
SMG6-219ENST00000575663 CSRNP2Q9H175 543 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 UNC45AQ9H3U1 944 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 NXF3Q9H4D5 531 aaKnown RBP6.56□□□□□ -1.36
SMG6-219ENST00000575663 C8orf33Q9H7E9 229 aaPredicted RBP6.56□□□□□ -1.36
SMG6-219ENST00000575663 C6orf50Q9HD87 102 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 HES2Q9Y543 173 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 TAF6LQ9Y6J9 622 aa6.56□□□□□ -1.36
SMG6-219ENST00000575663 BAZ2BQ9UIF8 2168 aaKnown RBP6.55□□□□□ -1.36
SMG6-219ENST00000575663 ESYT2A0FGR8 921 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 TMEM150BA6NC51 233 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 CASTOR2A6NHX0 329 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 INO80B-WBP1J3KQ70 363 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 ASAP2O43150 1006 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 TSPAN1O60635 241 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 RHOBTB1O94844 696 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 MICAL2O94851 1124 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 KIF4AO95239 1232 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 PTPN2P17706 415 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 CSRP1P21291 193 aaKnown RBP6.55□□□□□ -1.36
SMG6-219ENST00000575663 ELF1P32519 619 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 OR1D2P34982 312 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 RFC5P40937 340 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 PTH1RQ03431 593 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 SPIRE1Q08AE8 756 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 LAMTOR4Q0VGL1 99 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 TUSC3Q13454 348 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 TFDP1Q14186 410 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 KARSQ15046 597 aaKnown RBP6.55□□□□□ -1.36
SMG6-219ENST00000575663 FAM78AQ5JUQ0 283 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 CYP4A22Q5TCH4 519 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 PLA2G4FQ68DD2 849 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 IQCEQ6IPM2 695 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 B4GALNT3Q6L9W6 998 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 VITQ6UXI7 678 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 HAUS6Q7Z4H7 955 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 KBTBD6Q86V97 674 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 SGMS1Q86VZ5 419 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 SYNPOQ8N3V7 929 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 PRPF31Q8WWY3 499 aaKnown RBP6.55□□□□□ -1.36
SMG6-219ENST00000575663 SMARCD2Q92925 531 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 E2F7Q96AV8 911 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 LENG9Q96B70 501 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 CCDC136Q96JN2 1154 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 CEP170P1Q96L14 293 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 CEP89Q96ST8 783 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 CORO1BQ9BR76 489 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 ZMYND12Q9H0C1 365 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 RNF39Q9H2S5 420 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 SMOC1Q9H4F8 434 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 SLITRK6Q9H5Y7 841 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 MINDY3Q9H8M7 445 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 RBM12Q9NTZ6 932 aaKnown RBP6.55□□□□□ -1.36
SMG6-219ENST00000575663 MIOSQ9NXC5 875 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 MTRRQ9UBK8 725 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 PARP2Q9UGN5 583 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 WASF3Q9UPY6 502 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 NEUROG3Q9Y4Z2 214 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 CDY1Q9Y6F8 540 aa6.55□□□□□ -1.36
SMG6-219ENST00000575663 V9GY48 417 aaPredicted RBP6.55□□□□□ -1.36
SMG6-219ENST00000575663 WDR27A2RRH5 827 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 SLC38A8A6NNN8 435 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 GOLGA8AA7E2F4 631 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 C4orf47A7E2U8 309 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 GOLGA8BA8MQT2 603 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 PRRG1O14668 218 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 GIPC1O14908 333 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 ADAM12O43184 909 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 ZBTB43O43298 467 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 CAVIN2O95810 425 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 AKAP5P24588 427 aa6.54□□□□□ -1.36
SMG6-219ENST00000575663 RDXP35241 583 aaKnown RBP6.54□□□□□ -1.36
SMG6-219ENST00000575663 PSMC5P62195 406 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms