RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 MUC6Q6W4X9 2439 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 TCHHQ07283 1943 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 ANK1P16157 1881 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 PTGESO14684 152 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 SLC16A4O15374 487 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 LILRB3O75022 631 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 KIF4AO95239 1232 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 SPATA31D3P0C874 917 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 RPL17P18621 184 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 MATR3P43243 847 aaKnown RBP eCLIP10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 OSTNP61366 133 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 STRN3Q13033 797 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 MTMR3Q13615 1198 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 KLHL40Q2TBA0 621 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 NT5DC1Q5TFE4 455 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 KIAA0319Q5VV43 1072 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 ARL6IP4Q66PJ3 421 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 SPATA31D4Q6ZUB0 917 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 GPR149Q86SP6 731 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 RNF168Q8IYW5 571 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 PLCD3Q8N3E9 789 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 KREMEN2Q8NCW0 462 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 CALML4Q96GE6 196 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 TIPINQ9BVW5 301 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 PIDD1Q9HB75 910 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 TOPORSQ9NS56 1045 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 ANKFY1Q9P2R3 1169 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 SORCS3Q9UPU3 1222 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 TNFSF13BQ9Y275 285 aa10.6□□□□□ -0.71
NPLOC4-216ENST00000574344 CCDC195A0A1B0GUA6 201 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 SFI1A8K8P3 1242 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 STX6O43752 255 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 RFPL2O75678 378 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 ASGR2P07307 311 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 PLA2G4BP0C869 781 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 ZSCAN22P10073 491 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 UBA7P41226 1012 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 SMTNP53814 917 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 CACNB1Q02641 598 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 ELAVL2Q12926 359 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 MAPK7Q13164 816 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 DHX8Q14562 1220 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 PSMD5Q16401 504 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 FAM171A1Q5VUB5 890 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 PRSS55Q6UWB4 352 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 C15orf39Q6ZRI6 1047 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 C1orf186Q6ZWK4 172 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 OTOP3Q7RTS5 596 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 BRAPQ7Z569 592 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 DAW1Q8N136 415 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 CEP120Q8N960 986 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 FEZF2Q8TBJ5 459 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 SMG7Q92540 1137 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 BICD1Q96G01 975 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 PNMA5Q96PV4 448 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 ACO2Q99798 780 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 TTPALQ9BTX7 342 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 TARS2Q9BW92 718 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 CDT1Q9H211 546 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 CXCL16Q9H2A7 254 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 C17orf75Q9HAS0 396 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 RXFP1Q9HBX9 757 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 CHST7Q9NS84 486 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 ARHGAP28Q9P2N2 729 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 USTQ9Y2C2 406 aa10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 ARIH1Q9Y4X5 557 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-216ENST00000574344 TGM5O43548 720 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 EFEMP2O95967 443 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 BMP15O95972 392 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 KRT18P05783 430 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 PLS3P13797 630 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 GUCY2CP25092 1073 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 GBP2P32456 591 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 GRM5P41594 1212 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 CLCNKBP51801 687 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 PKP1Q13835 747 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 RTP2Q5QGT7 225 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 HYIQ5T013 277 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 LIN9Q5TKA1 542 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 MPZL3Q6UWV2 235 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 GPBP1Q86WP2 473 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 UBALD2Q8IYN6 164 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 ZDHHC14Q8IZN3 488 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 FBXL6Q8N531 539 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 SYT2Q8N9I0 419 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 STAMQ92783 540 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 AK8Q96MA6 479 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 GZF1Q9H116 711 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 PLEKHA4Q9H4M7 779 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 GOLGA2P5Q9HBQ8 144 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 FNIP2Q9P278 1114 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 LIMD1Q9UGP4 676 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 KCNG1Q9UIX4 513 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 ZDBF2Q9HCK1 2354 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 CLUHO75153 1309 aa10.58□□□□□ -0.72
NPLOC4-216ENST00000574344 NPHP3-ACAD11A0A0J9YXS1 232 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 H0YCG3 227 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 TRAPPC3O43617 180 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 B3GAT3O94766 335 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms