RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 ENOSF1Q7L5Y1 443 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 LRRN4CLQ8ND94 238 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 NLRP4Q96MN2 994 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 ALS2CR12Q96Q35 445 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 PRDM10Q9NQV6 1147 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 Q9Y3F1 56 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 CAPN6Q9Y6Q1 641 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 GJB1P08034 283 aa30.69■■■□□ 2.5
CTDNEP1-210ENST00000574322 PHKA2P46019 1235 aa30.69■■■□□ 2.5
CTDNEP1-210ENST00000574322 AP3M2P53677 418 aa30.69■■■□□ 2.5
CTDNEP1-210ENST00000574322 LNX1Q8TBB1 728 aaPredicted RBP30.69■■■□□ 2.5
CTDNEP1-210ENST00000574322 PRMT7Q9NVM4 692 aaPredicted RBP30.69■■■□□ 2.5
CTDNEP1-210ENST00000574322 PTPN22Q9Y2R2 807 aa30.69■■■□□ 2.5
CTDNEP1-210ENST00000574322 PTCH2Q9Y6C5 1203 aa30.69■■■□□ 2.5
CTDNEP1-210ENST00000574322 MOCS3O95396 460 aa30.68■■■□□ 2.5
CTDNEP1-210ENST00000574322 TNNI1P19237 187 aa30.68■■■□□ 2.5
CTDNEP1-210ENST00000574322 PPFIA1Q13136 1202 aa30.68■■■□□ 2.5
CTDNEP1-210ENST00000574322 GRIK4Q16099 956 aa30.68■■■□□ 2.5
CTDNEP1-210ENST00000574322 PRAMEF19Q5SWL8 479 aa30.68■■■□□ 2.5
CTDNEP1-210ENST00000574322 MARCH8Q5T0T0 291 aa30.68■■■□□ 2.5
CTDNEP1-210ENST00000574322 MPZL3Q6UWV2 235 aa30.68■■■□□ 2.5
CTDNEP1-210ENST00000574322 PPM1KQ8N3J5 372 aa30.68■■■□□ 2.5
CTDNEP1-210ENST00000574322 ZBTB10Q96DT7 871 aa30.68■■■□□ 2.5
CTDNEP1-210ENST00000574322 TNFSF13BQ9Y275 285 aa30.68■■■□□ 2.5
CTDNEP1-210ENST00000574322 RRN3P2A6NIE6 340 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 ATP1A1P05023 1023 aaKnown RBP30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 CEP112Q8N8E3 955 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 TRIB2Q92519 343 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 INO80B-WBP1J3KQ70 363 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 DYNC1LI2O43237 492 aaPredicted RBP30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 ELNP15502 786 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 SURF1Q15526 300 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 ATF7IP2Q5U623 682 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 TDRD10Q5VZ19 366 aaKnown RBP30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 KAT5Q92993 513 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 TCHPQ9BT92 498 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 PACSIN1Q9BY11 444 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 INO80BQ9C086 356 aaPredicted RBP30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 MINDY3Q9H8M7 445 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 CPSF3Q9UKF6 684 aaKnown RBP30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 SAR1BQ9Y6B6 198 aa30.67■■■□□ 2.5
CTDNEP1-210ENST00000574322 PTPRJQ12913 1337 aa30.66■■■□□ 2.5
CTDNEP1-210ENST00000574322 F2P00734 622 aa30.66■■■□□ 2.5
CTDNEP1-210ENST00000574322 PRLRP16471 622 aa30.66■■■□□ 2.5
CTDNEP1-210ENST00000574322 NAA30Q147X3 362 aaPredicted RBP30.66■■■□□ 2.5
CTDNEP1-210ENST00000574322 SRGAP1Q7Z6B7 1085 aa30.66■■■□□ 2.5
CTDNEP1-210ENST00000574322 ZNF710Q8N1W2 664 aa30.66■■■□□ 2.5
CTDNEP1-210ENST00000574322 PXYLP1Q8TE99 480 aa30.66■■■□□ 2.5
CTDNEP1-210ENST00000574322 AGPAT1Q99943 283 aa30.66■■■□□ 2.5
CTDNEP1-210ENST00000574322 PCDHGC5Q9Y5F6 944 aa30.66■■■□□ 2.5
CTDNEP1-210ENST00000574322 A0A0A6YYK5 440 aaPredicted RBP30.65■■■□□ 2.5
CTDNEP1-210ENST00000574322 H2AFZP0C0S5 128 aa30.65■■■□□ 2.5
CTDNEP1-210ENST00000574322 H2AFVQ71UI9 128 aa30.65■■■□□ 2.5
CTDNEP1-210ENST00000574322 ENC1O14682 589 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 HLA-DRAP01903 254 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 CYP2C19P33261 490 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 POU5F1Q01860 360 aaKnown RBP30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 TLK2Q86UE8 772 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 WDR49Q8IV35 697 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 GLYCTKQ8IVS8 523 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 SLAIN1Q8ND83 568 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 MYH10P35580 1976 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 VNN1O95497 513 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 IQCF3P0C7M6 154 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 TNFAIP3P21580 790 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 TUBB4BP68371 445 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 AMHR2Q16671 573 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 MFSD14CQ5VZR4 134 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 RSRC2Q7L4I2 434 aaKnown RBP30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 ZBTB33Q86T24 672 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 U2AF1L4Q8WU68 220 aaKnown RBP30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 TATDN2Q93075 761 aa30.64■■■□□ 2.5
CTDNEP1-210ENST00000574322 KAT6AQ92794 2004 aa30.64■■■□□ 2.49
CTDNEP1-210ENST00000574322 A0A087WZ62 844 aa30.63■■■□□ 2.49
CTDNEP1-210ENST00000574322 KIAA0319LQ8IZA0 1049 aa30.63■■■□□ 2.49
CTDNEP1-210ENST00000574322 KAT2BQ92831 832 aa30.63■■■□□ 2.49
CTDNEP1-210ENST00000574322 MAP7D2Q96T17 732 aa30.63■■■□□ 2.49
CTDNEP1-210ENST00000574322 FDXACB1Q9BRP7 624 aaPredicted RBP30.63■■■□□ 2.49
CTDNEP1-210ENST00000574322 C1orf112Q9NSG2 853 aa30.63■■■□□ 2.49
CTDNEP1-210ENST00000574322 AKT3Q9Y243 479 aa30.63■■■□□ 2.49
CTDNEP1-210ENST00000574322 GRK4P32298 578 aa30.62■■■□□ 2.49
CTDNEP1-210ENST00000574322 TNFSF9P41273 254 aa30.62■■■□□ 2.49
CTDNEP1-210ENST00000574322 PKN2Q16513 984 aaKnown RBP30.62■■■□□ 2.49
CTDNEP1-210ENST00000574322 WDR44Q5JSH3 913 aa30.62■■■□□ 2.49
CTDNEP1-210ENST00000574322 LMBRD2Q68DH5 695 aaPredicted RBP30.62■■■□□ 2.49
CTDNEP1-210ENST00000574322 SMYD5Q6GMV2 418 aa30.62■■■□□ 2.49
CTDNEP1-210ENST00000574322 ZNF410Q86VK4 478 aa30.62■■■□□ 2.49
CTDNEP1-210ENST00000574322 UBXN4Q92575 508 aa30.62■■■□□ 2.49
CTDNEP1-210ENST00000574322 NOCTQ9UK39 431 aaKnown RBP30.62■■■□□ 2.49
CTDNEP1-210ENST00000574322 NRCAMQ92823 1304 aa30.62■■■□□ 2.49
CTDNEP1-210ENST00000574322 B4GALT5O43286 388 aa30.61■■■□□ 2.49
CTDNEP1-210ENST00000574322 ZEB2O60315 1214 aa30.61■■■□□ 2.49
CTDNEP1-210ENST00000574322 HMGCRP04035 888 aa30.61■■■□□ 2.49
CTDNEP1-210ENST00000574322 HARSP12081 509 aaKnown RBP30.61■■■□□ 2.49
CTDNEP1-210ENST00000574322 CDC42EP1Q00587 391 aa30.61■■■□□ 2.49
CTDNEP1-210ENST00000574322 IFI16Q16666 785 aaKnown RBP30.61■■■□□ 2.49
CTDNEP1-210ENST00000574322 ERCC6LQ2NKX8 1250 aa30.61■■■□□ 2.49
CTDNEP1-210ENST00000574322 EPS8L1Q8TE68 723 aa30.61■■■□□ 2.49
CTDNEP1-210ENST00000574322 HDAC6Q9UBN7 1215 aa30.61■■■□□ 2.49
CTDNEP1-210ENST00000574322 PIK3CAP42336 1068 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms