RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ESRP1Q6NXG1 681 aaKnown RBP6.7□□□□□ -1.34
SF3B3-214ENST00000572365 MIB1Q86YT6 1006 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 IRF2BP1Q8IU81 584 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 ZZZ3Q8IYH5 903 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 TDHQ8IZJ6 230 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 MAFAQ8NHW3 353 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-214ENST00000572365 PPM1EQ8WY54 764 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 AHCYL2Q96HN2 611 aaKnown RBP6.7□□□□□ -1.34
SF3B3-214ENST00000572365 CDX2Q99626 313 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-214ENST00000572365 HSPBP1Q9NZL4 362 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 DBR1Q9UK59 544 aaKnown RBP6.7□□□□□ -1.34
SF3B3-214ENST00000572365 HCFC2Q9Y5Z7 792 aa6.7□□□□□ -1.34
SF3B3-214ENST00000572365 OAS3Q9Y6K5 1087 aaKnown RBP6.7□□□□□ -1.34
SF3B3-214ENST00000572365 IBTKQ9P2D0 1353 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-214ENST00000572365 KRTAP9-6A0A140TA67 174 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 SCO2A0A1W2PP80 73 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 BTBD19C9JJ37 291 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 SNAP23O00161 211 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 HRKO00198 91 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 ABLIM1O14639 778 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 U2AF1L5P0DN76 240 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-214ENST00000572365 HSPA5P11021 654 aaKnown RBP6.69□□□□□ -1.34
SF3B3-214ENST00000572365 FAHP16930 419 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 CD40P25942 277 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 KLRK1P26718 216 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 RBM5P52756 815 aaKnown RBP eCLIP6.69□□□□□ -1.34
SF3B3-214ENST00000572365 U2AF1Q01081 240 aaKnown RBP eCLIP6.69□□□□□ -1.34
SF3B3-214ENST00000572365 PRKCZQ05513 592 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 MAP3K12Q12852 859 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 EPHA7Q15375 998 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 LRIT3Q3SXY7 679 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 PAN2Q504Q3 1202 aaKnown RBP6.69□□□□□ -1.34
SF3B3-214ENST00000572365 APOBEC3FQ8IUX4 373 aaKnown RBP6.69□□□□□ -1.34
SF3B3-214ENST00000572365 FAM126BQ8IXS8 530 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 PRMT6Q96LA8 375 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-214ENST00000572365 ANP32EQ9BTT0 268 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 ZDHHC5Q9C0B5 715 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 ZFP64Q9NPA5 681 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 SRRDQ9UH36 339 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 MYPNQ86TC9 1320 aa6.69□□□□□ -1.34
SF3B3-214ENST00000572365 WDFY4Q6ZS81 3184 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-214ENST00000572365 FOXP2O15409 715 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 TLR2O60603 784 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 GLI1P08151 1106 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 GRIN1Q05586 938 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 KLF1Q13351 362 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-214ENST00000572365 SF3B3Q15393 1217 aaKnown RBP6.68□□□□□ -1.34
SF3B3-214ENST00000572365 DLGAP5Q15398 846 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 KRT24Q2M2I5 525 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 ZC3H14Q6PJT7 736 aaKnown RBP6.68□□□□□ -1.34
SF3B3-214ENST00000572365 ZSWIM9Q86XI8 627 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 RAVER1Q8IY67 606 aaKnown RBP6.68□□□□□ -1.34
SF3B3-214ENST00000572365 USP38Q8NB14 1042 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 CHMP4CQ96CF2 233 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 SMAD5Q99717 465 aaKnown RBP6.68□□□□□ -1.34
SF3B3-214ENST00000572365 YIPF4Q9BSR8 244 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 TOPORSQ9NS56 1045 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-214ENST00000572365 C14orf119Q9NWQ9 140 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 DTLQ9NZJ0 730 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 USP36Q9P275 1121 aaKnown RBP6.68□□□□□ -1.34
SF3B3-214ENST00000572365 CHPF2Q9P2E5 772 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 TNKSO95271 1327 aa6.68□□□□□ -1.34
SF3B3-214ENST00000572365 PRAMEF25A6NGN4 478 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 TCP10L2B9ZVM9 353 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 BIN1O00499 593 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 UBXN2AP68543 259 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 ADCY1Q08828 1119 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 VGLL4Q14135 290 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 NFE2Q16621 373 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-214ENST00000572365 SUPT20HL1Q3ZLR7 823 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 FRMD7Q6ZUT3 714 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 CERS5Q8N5B7 392 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 ASB15Q8WXK1 588 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 ZKSCAN4Q969J2 545 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-214ENST00000572365 TOE1Q96GM8 510 aaKnown RBP6.67□□□□□ -1.34
SF3B3-214ENST00000572365 ZBED3Q96IU2 234 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-214ENST00000572365 MS4A5Q9H3V2 200 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 NOC2LQ9Y3T9 749 aaKnown RBP6.67□□□□□ -1.34
SF3B3-214ENST00000572365 BDP1A6H8Y1 2624 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 LAMB1P07942 1786 aa6.67□□□□□ -1.34
SF3B3-214ENST00000572365 LRG1P02750 347 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 MMEP08473 750 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 AOAHP28039 575 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 DBPQ10586 325 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-214ENST00000572365 MOGSQ13724 837 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 KCNMB1Q16558 191 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 OLFML2BQ68BL8 750 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 C17orf99Q6UX52 265 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 ETV3LQ6ZN32 361 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 RTN4RL1Q86UN2 441 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-214ENST00000572365 Q8N3U1 123 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 LMBR1Q8WVP7 490 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 FOXRED1Q96CU9 486 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-214ENST00000572365 SLC13A1Q9BZW2 595 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 TMEM39BQ9GZU3 492 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 ZNF552Q9H707 407 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-214ENST00000572365 TDRD3Q9H7E2 651 aaKnown RBP6.66□□□□□ -1.34
SF3B3-214ENST00000572365 BTBD7Q9P203 1132 aa6.66□□□□□ -1.34
SF3B3-214ENST00000572365 TCEAL9Q9UHQ7 104 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms