RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ZNF75DP51815 510 aa7.36□□□□□ -1.23
LINC00517-202ENST00000554257 VWA3BQ502W6 1294 aa7.36□□□□□ -1.23
LINC00517-202ENST00000554257 TDRD10Q5VZ19 366 aaKnown RBP7.36□□□□□ -1.23
LINC00517-202ENST00000554257 ECHDC2Q86YB7 292 aa7.36□□□□□ -1.23
LINC00517-202ENST00000554257 MRFAP1L1Q96HT8 127 aa7.36□□□□□ -1.23
LINC00517-202ENST00000554257 POP1Q99575 1024 aaKnown RBP7.36□□□□□ -1.23
LINC00517-202ENST00000554257 CGRRF1Q99675 332 aa7.36□□□□□ -1.23
LINC00517-202ENST00000554257 TUBGCP2Q9BSJ2 902 aa7.36□□□□□ -1.23
LINC00517-202ENST00000554257 TMEM117Q9H0C3 514 aa7.36□□□□□ -1.23
LINC00517-202ENST00000554257 XYLT2Q9H1B5 865 aa7.36□□□□□ -1.23
LINC00517-202ENST00000554257 ELAC1Q9H777 363 aaKnown RBP7.36□□□□□ -1.23
LINC00517-202ENST00000554257 FAM105AQ9NUU6 356 aa7.36□□□□□ -1.23
LINC00517-202ENST00000554257 LACTBL1A8MY62 500 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 GPR182O15218 404 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 RPS6KA5O75582 802 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 PARNO95453 639 aaKnown RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 CXCL8P10145 99 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 GTF2H1P32780 548 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 SOX4Q06945 474 aaPredicted RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 MAN2A1Q16706 1144 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 ZACNQ401N2 412 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 RSPH3Q86UC2 560 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 FAM186BQ8IYM0 893 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 OR5B17Q8NGF7 314 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 APBB2Q92870 758 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 FAM213AQ9BRX8 229 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 MSTO1Q9BUK6 570 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 TMEM106CQ9BVX2 250 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 XPO4Q9C0E2 1151 aaKnown RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 DERAQ9Y315 318 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 HES2Q9Y543 173 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 NME7Q9Y5B8 376 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 PCDHB2Q9Y5E7 798 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 HELZP42694 1942 aaKnown RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 TLR3O15455 904 aaKnown RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 NFICP08651 508 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 JAM2P57087 298 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 CHMP4BP1P59074 171 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 ZNF568Q3ZCX4 644 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 HSP90AA4PQ58FG1 418 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 POMGNT1Q8WZA1 660 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 KIAA1586Q9HCI6 787 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 DENND4AQ7Z401 1863 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 ANAPC1Q9H1A4 1944 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 DCDC2CA8MYV0 355 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 CLDN3O15551 220 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 LDHAP00338 332 aaKnown RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 MYCNP04198 464 aaPredicted RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 TRIM49P0CI25 452 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 TRIM49CP0CI26 452 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 VAMP7P51809 220 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 APBA1Q02410 837 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 DSC1Q08554 894 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 PAK2Q13177 524 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 INTS8Q75QN2 995 aaKnown RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 CATSPER4Q7RTX7 472 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 ZBTB33Q86T24 672 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 TMEM139Q8IV31 216 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 WDR49Q8IV35 697 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 VSTM4Q8IW00 320 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 CASD1Q96PB1 797 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 PPP1R9BQ96SB3 815 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 TSG101Q99816 390 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 IFIH1Q9BYX4 1025 aaKnown RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 VRTNQ9H8Y1 702 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 PLEKHA5Q9HAU0 1116 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 SNTG2Q9NY99 539 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 TAB2Q9NYJ8 693 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 ANKFY1Q9P2R3 1169 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 PIN4Q9Y237 131 aaKnown RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 ATP11BQ9Y2G3 1177 aa7.35□□□□□ -1.23
LINC00517-202ENST00000554257 KIF26AQ9ULI4 1882 aaPredicted RBP7.35□□□□□ -1.23
LINC00517-202ENST00000554257 A0A1W2PQC6 194 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 CETN3O15182 167 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 OFD1O75665 1012 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 STAU1O95793 577 aaKnown RBP7.34□□□□□ -1.23
LINC00517-202ENST00000554257 CLTAP09496 248 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 FMO5P49326 533 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 AARSP49588 968 aaKnown RBP eCLIP7.34□□□□□ -1.23
LINC00517-202ENST00000554257 KCNH2Q12809 1159 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 PTPN21Q16825 1174 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 JADE1Q6IE81 842 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 CNKSR3Q6P9H4 555 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 DBF4BQ8NFT6 615 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 TSPAN18Q96SJ8 248 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 NDST4Q9H3R1 872 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 PDE11AQ9HCR9 933 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 FBXL5Q9UKA1 691 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 RECQL4O94761 1208 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 RPL13P26373 211 aaKnown RBP7.34□□□□□ -1.23
LINC00517-202ENST00000554257 LRPAP1P30533 357 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 KYAT1Q16773 422 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.34□□□□□ -1.23
LINC00517-202ENST00000554257 HS2ST1Q7LGA3 356 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 RNF168Q8IYW5 571 aaPredicted RBP7.34□□□□□ -1.23
LINC00517-202ENST00000554257 SYCP3Q8IZU3 236 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 C1orf127Q8N9H9 656 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 BAP1Q92560 729 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 SYT11Q9BT88 431 aa7.34□□□□□ -1.23
LINC00517-202ENST00000554257 APOBEC3GQ9HC16 384 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms