RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 APOL5Q9BWW9 433 aa6.51□□□□□ -1.37
SYNE2-210ENST00000553455 AGO3Q9H9G7 860 aaKnown RBP6.51□□□□□ -1.37
SYNE2-210ENST00000553455 H3BUI4 141 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 B4GALT4O60513 344 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 SASH1O94885 1247 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 MYL3P08590 195 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 IFIT2P09913 472 aaKnown RBP6.5□□□□□ -1.37
SYNE2-210ENST00000553455 IL2RBP14784 551 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 FLT3LGP49771 235 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 GZMKP49863 264 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 GJA9P57773 515 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 RIN1Q13671 783 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 FGL2Q14314 439 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 ZNF124Q15973 351 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 ZNF568Q3ZCX4 644 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 AFMIDQ63HM1 303 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 PLXDC1Q8IUK5 500 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 GPR135Q8IZ08 494 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 KRT78Q8N1N4 520 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 CELF5Q8N6W0 485 aaKnown RBP6.5□□□□□ -1.37
SYNE2-210ENST00000553455 OR5M3Q8NGP4 307 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 PARD3BQ8TEW8 1205 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 KLHL11Q9NVR0 708 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 PNPOQ9NVS9 261 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 NCDNQ9UBB6 729 aa6.5□□□□□ -1.37
SYNE2-210ENST00000553455 PUF60Q9UHX1 559 aaKnown RBP6.5□□□□□ -1.37
SYNE2-210ENST00000553455 RUVBL1Q9Y265 456 aaKnown RBP6.5□□□□□ -1.37
SYNE2-210ENST00000553455 CFAP69A5D8W1 941 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 F2RL2O00254 374 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 PAX4O43316 350 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 FRS3O43559 492 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 PQBP1O60828 265 aaKnown RBP6.49□□□□□ -1.37
SYNE2-210ENST00000553455 STC2O76061 302 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 SERPINB3P29508 390 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 PRDX5P30044 214 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 TM4SF4P48230 202 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 APBA1Q02410 837 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 KIAA2012Q0VF49 1180 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 MRPL49Q13405 166 aaKnown RBP6.49□□□□□ -1.37
SYNE2-210ENST00000553455 POLD3Q15054 466 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-210ENST00000553455 FLYWCH1Q4VC44 716 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 FAM47AQ5JRC9 791 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 CIAPIN1Q6FI81 312 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 PDZD4Q76G19 769 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-210ENST00000553455 C11orf96Q7Z7L8 435 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 FAM124AQ86V42 546 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 PPP1R3BQ86XI6 285 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 FAM90A1Q86YD7 464 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 SH2D3CQ8N5H7 860 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 SHCBP1Q8NEM2 672 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 MTFMTQ96DP5 389 aaKnown RBP6.49□□□□□ -1.37
SYNE2-210ENST00000553455 IL17RAQ96F46 866 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 NEIL1Q96FI4 390 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-210ENST00000553455 DPYSL5Q9BPU6 564 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 WDCPQ9H6R7 721 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 MOCS1Q9NZB8 636 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 SLC23A1Q9UHI7 598 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 FEZ2Q9UHY8 353 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-210ENST00000553455 OAZ3Q9UMX2 235 aa6.49□□□□□ -1.37
SYNE2-210ENST00000553455 ARID4BQ4LE39 1312 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-210ENST00000553455 ADAMTS20P59510 1910 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 UBE2QL1A1L167 161 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 PHGDHO43175 533 aaKnown RBP6.48□□□□□ -1.37
SYNE2-210ENST00000553455 CD1AP06126 327 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 SBK3P0C264 359 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 FTH1P19P0C7X4 201 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 HTR3AP46098 478 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 KCNC1P48547 511 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 ALDH5A1P51649 535 aaPredicted RBP6.48□□□□□ -1.37
SYNE2-210ENST00000553455 NPEPPSP55786 919 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 RAC3P60763 192 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 DUSP8Q13202 625 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 FAM214AQ32MH5 1076 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 NT5DC1Q5TFE4 455 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 OTUD7BQ6GQQ9 843 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 IL31RAQ8NI17 732 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 SLC35B2Q8TB61 432 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 ANKS1AQ92625 1134 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 GJA10Q969M2 543 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 MYOCQ99972 504 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 ELAC2Q9BQ52 826 aaKnown RBP6.48□□□□□ -1.37
SYNE2-210ENST00000553455 KRTAP9-2Q9BYQ4 174 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 RIPOR2Q9Y4F9 1068 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 COMMD10Q9Y6G5 202 aa6.48□□□□□ -1.37
SYNE2-210ENST00000553455 CXorf49A8MYA2 514 aaPredicted RBP6.47□□□□□ -1.37
SYNE2-210ENST00000553455 TEX33O43247 280 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 LDHAP00338 332 aaKnown RBP6.47□□□□□ -1.37
SYNE2-210ENST00000553455 MYF5P13349 255 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 NPR1P16066 1061 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 PKN1Q16512 942 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 LONRF1Q17RB8 773 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 DACT2Q5SW24 774 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 BORAQ6PGQ7 559 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 SEM1Q6ZVN7 128 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 FRMD5Q7Z6J6 570 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 MORC1Q86VD1 984 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 C1QL4Q86Z23 238 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 SPICE1Q8N0Z3 855 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 MRGPRX1Q96LB2 322 aa6.47□□□□□ -1.37
SYNE2-210ENST00000553455 C1orf43Q9BWL3 253 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms