RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 FAM173BQ6P4H8 233 aa14.41□□□□□ -0.1
HNRNPC-205ENST00000553300 PDXDC1Q6P996 788 aa14.41□□□□□ -0.1
HNRNPC-205ENST00000553300 HAUS6Q7Z4H7 955 aa14.41□□□□□ -0.1
HNRNPC-205ENST00000553300 MYCT1Q8N699 235 aa14.41□□□□□ -0.1
HNRNPC-205ENST00000553300 KRI1Q8N9T8 703 aaKnown RBP14.41□□□□□ -0.1
HNRNPC-205ENST00000553300 EPSTI1Q96J88 318 aa14.41□□□□□ -0.1
HNRNPC-205ENST00000553300 ZNF396Q96N95 335 aaPredicted RBP14.41□□□□□ -0.1
HNRNPC-205ENST00000553300 SLC38A7Q9NVC3 462 aa14.41□□□□□ -0.1
HNRNPC-205ENST00000553300 FNIP2Q9P278 1114 aa14.41□□□□□ -0.1
HNRNPC-205ENST00000553300 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.41□□□□□ -0.1
HNRNPC-205ENST00000553300 NPHP3-ACAD11A0A0J9YXS1 232 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 C2CD2LO14523 706 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 TEX28O15482 410 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 CLDN3O15551 220 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 TRAK2O60296 914 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 TBCAO75347 108 aaKnown RBP14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 EPCAMP16422 314 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 NASPP49321 788 aaPredicted RBP14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 CEBPZQ03701 1054 aaKnown RBP14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 KYAT1Q16773 422 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 RRAGBQ5VZM2 374 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 DCLRE1AQ6PJP8 1040 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 ALKAL1Q6UXT8 129 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 CCDC73Q6ZRK6 1079 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 TAS1R1Q7RTX1 841 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 HDAC7Q8WUI4 952 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 DDX27Q96GQ7 796 aaKnown RBP14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 FBXL18Q96ME1 805 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 PPP1R10Q96QC0 940 aaKnown RBP14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 USP28Q96RU2 1077 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 GPR62Q9BZJ7 368 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 SFXN1Q9H9B4 322 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 NR2E1Q9Y466 385 aa14.4□□□□□ -0.1
HNRNPC-205ENST00000553300 CITO14578 2027 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 SMIM28A0A1B0GU29 152 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 CASTOR2A6NHX0 329 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 SPDYE4A6NLX3 237 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 TMEM189-UBE2V1I3L0A0 370 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 ABLIM1O14639 778 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 TRAPPC3O43617 180 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 GLUD1P00367 558 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 MCL1Q07820 350 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 NOLC1Q14978 699 aaKnown RBP eCLIP14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 STK38Q15208 465 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 TMEM31Q5JXX7 168 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 CYP26C1Q6V0L0 522 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 SV2BQ7L1I2 683 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 ZBTB33Q86T24 672 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 RNF135Q8IUD6 432 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 KHSRPQ92945 711 aaKnown RBP eCLIP14.39□□□□□ -0.112e-7■■■□□ 17.4
HNRNPC-205ENST00000553300 BICD1Q96G01 975 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 CLIC6Q96NY7 704 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 PAAF1Q9BRP4 392 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 TTPALQ9BTX7 342 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 PLEKHA4Q9H4M7 779 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 TRIP11Q15643 1979 aa14.39□□□□□ -0.11
HNRNPC-205ENST00000553300 F8W810 466 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 PPP6R2O75170 966 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 KCNE1P15382 129 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 RPL9P32969 192 aaKnown RBP14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 OSTNP61366 133 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 UPP1Q16831 310 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 HERC4Q5GLZ8 1057 aaPredicted RBP14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 SPECC1Q5M775 1068 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 RARS2Q5T160 578 aaKnown RBP14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 C15orf39Q6ZRI6 1047 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 USP49Q70CQ1 688 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 CEP120Q8N960 986 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 LINC00301Q8NCQ3 95 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 CMASQ8NFW8 434 aaPredicted RBP14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 LRRC15Q8TF66 581 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 RIN2Q8WYP3 895 aaPredicted RBP14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 ZBTB45Q96K62 511 aaPredicted RBP14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 RPGRIP1Q96KN7 1286 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 TSPAN18Q96SJ8 248 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 APOL5Q9BWW9 433 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 RHOBTB2Q9BYZ6 727 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 ST6GALNAC4Q9H4F1 302 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 PLEKHA5Q9HAU0 1116 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 CNTN3Q9P232 1028 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 ANKFY1Q9P2R3 1169 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 SEL1LQ9UBV2 794 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 TBX20Q9UMR3 447 aa14.38□□□□□ -0.11
HNRNPC-205ENST00000553300 K7ENM7 598 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 HNRNPDLO14979 420 aaKnown RBP14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 SPTLC2O15270 562 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 B3GAT3O94766 335 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 KIF4AO95239 1232 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 YEATS4O95619 227 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 PIGRP01833 764 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 CLTAP09496 248 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 MATR3P43243 847 aaKnown RBP eCLIP14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 LIG4P49917 911 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 GTF2BQ00403 316 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 GLRA4Q5JXX5 417 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 FAM171A1Q5VUB5 890 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 ATL3Q6DD88 541 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 PIK3R5Q8WYR1 880 aa14.37□□□□□ -0.11
HNRNPC-205ENST00000553300 RABGGTAQ92696 567 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms