RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 MDM1Q8TC05 714 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 CPA5Q8WXQ8 436 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 NT5C1BQ96P26 610 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 EPN3Q9H201 632 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 EPB41L4BQ9H329 900 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 ACAD9Q9H845 621 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 TMEM8AQ9HCN3 771 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 PDLIM7Q9NR12 457 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 GPRC5DQ9NZD1 345 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 EXOC7Q9UPT5 735 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 AFG3L2Q9Y4W6 797 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 PAPPA2Q9BXP8 1791 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 PHF2O75151 1096 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 CAND2O75155 1236 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 CFHP08603 1231 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 ACOT2P49753 483 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 PDE6CP51160 858 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 SEZ6Q53EL9 994 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 CCDC137Q6PK04 289 aaKnown RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 FMNL3Q8IVF7 1028 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 ZNF526Q8TF50 670 aaPredicted RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 ZNF473Q8WTR7 871 aaKnown RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 SPIRE2Q8WWL2 714 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 DDX1Q92499 740 aaKnown RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 TMEM143Q96AN5 459 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 ZBTB45Q96K62 511 aaPredicted RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 IWS1Q96ST2 819 aa12.36□□□□□ -0.43
C11orf54-214ENST00000540113 JPH1Q9HDC5 661 aaPredicted RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 DIS3Q9Y2L1 958 aaKnown RBP12.36□□□□□ -0.43
C11orf54-214ENST00000540113 NFASCO94856 1347 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 SPATA31C2B4DYI2 1134 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 PMM2O15305 246 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 MAFGO15525 162 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 CLDN3O15551 220 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 GRIN3BO60391 1043 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 RARAP10276 462 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 MAGEA9P43362 315 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 ACTR2P61160 394 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 CDR2Q01850 454 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 SP2Q02086 613 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 PRKCEQ02156 737 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 NOL9Q5SY16 702 aaKnown RBP12.35□□□□□ -0.43
C11orf54-214ENST00000540113 SEL1L2Q5TEA6 688 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 ABHD15Q6UXT9 468 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 PACS2Q86VP3 889 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 NLRP14Q86W24 1093 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 MICALL1Q8N3F8 863 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 SLC17A8Q8NDX2 589 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 C1orf54Q8WWF1 131 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 CD101Q93033 1021 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 ATP6V0A1Q93050 837 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
C11orf54-214ENST00000540113 HVCN1Q96D96 273 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 CCT8L2Q96SF2 557 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 NAP1L3Q99457 506 aaPredicted RBP12.35□□□□□ -0.43
C11orf54-214ENST00000540113 NTPCRQ9BSD7 190 aaKnown RBP12.35□□□□□ -0.43
C11orf54-214ENST00000540113 FHDC1Q9C0D6 1143 aaPredicted RBP12.35□□□□□ -0.43
C11orf54-214ENST00000540113 POLR3FQ9H1D9 316 aaPredicted RBP12.35□□□□□ -0.43
C11orf54-214ENST00000540113 GRHL1Q9NZI5 618 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 SLC9A2Q9UBY0 812 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 SYNGAP1Q96PV0 1343 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 MYH9P35579 1960 aaKnown RBP12.35□□□□□ -0.43
C11orf54-214ENST00000540113 OTOFQ9HC10 1997 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 A0A0G2JMZ2 1700 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 PSAPP07602 524 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 FGFR4P22455 802 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 GPC3P51654 580 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 HADHBP55084 474 aaKnown RBP12.35□□□□□ -0.43
C11orf54-214ENST00000540113 MTMR3Q13615 1198 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 ZBTB41Q5SVQ8 909 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 PASD1Q8IV76 773 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 CCDC105Q8IYK2 499 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 MYCBPAPQ8TBZ2 947 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 KIFAP3Q92845 792 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 MFSD14AQ96MC6 490 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 FAM118BQ9BPY3 351 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 TXLNGYQ9BZA5 131 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 SEMA4AQ9H3S1 761 aa12.35□□□□□ -0.43
C11orf54-214ENST00000540113 PTPRJQ12913 1337 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 MIF4GDA9UHW6 222 aaKnown RBP12.34□□□□□ -0.43
C11orf54-214ENST00000540113 O00370 1275 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 CYP1A2P05177 515 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 GZMAP12544 262 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 CTNNA2P26232 953 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 SLCO1A2P46721 670 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 PMS2P54278 862 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 OTUD6AQ7L8S5 288 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 CCDC25Q86WR0 208 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 GPD1LQ8N335 351 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.34□□□□□ -0.43
C11orf54-214ENST00000540113 ATG4AQ8WYN0 398 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 HERPUD2Q9BSE4 406 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 HAPLN2Q9GZV7 340 aa12.34□□□□□ -0.43
C11orf54-214ENST00000540113 GJB6O95452 261 aa12.33□□□□□ -0.43
C11orf54-214ENST00000540113 HARSP12081 509 aaKnown RBP12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms